Evidence map›Paper›PMID 37220097›Full record

ArticlePloS one2023

Development and characterization of nanobodies that specifically target the oncogenic Phosphatase of Regenerating Liver-3 (PRL-3) and impact its interaction with a known binding partner, CNNM3.

Caroline N Smith, Kyle Kihn, Zachary A Williamson, K Martin Chow, Louis B Hersh, Konstantin V Korotkov, Daniel Deredge, Jessica S Blackburn

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Targeting Moonlighting Enzymes in Cancer.Molecules (Basel, Switzerland) · 2024
    Review
  5. Targeting PRL phosphatases in hematological malignancies.Expert opinion on therapeutic targets · 2024
    Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Caroline N SmithDepartment of Molecular and Cellular Biochemistry, University of Kentucky, Lexington, Kentucky, United States of America.
Kyle KihnUniversity of Maryland School of Pharmacy, Baltimore, Maryland, United States of America.
Zachary A WilliamsonDepartment of Molecular and Cellular Biochemistry, University of Kentucky, Lexington, Kentucky, United States of America.
K Martin ChowDepartment of Molecular and Cellular Biochemistry, University of Kentucky, Lexington, Kentucky, United States of America.
Louis B HershDepartment of Molecular and Cellular Biochemistry, University of Kentucky, Lexington, Kentucky, United States of America.
Konstantin V KorotkovDepartment of Molecular and Cellular Biochemistry, University of Kentucky, Lexington, Kentucky, United States of America.
Daniel DeredgeUniversity of Maryland School of Pharmacy, Baltimore, Maryland, United States of America.ORCID 0000-0002-6897-6523
Jessica S BlackburnDepartment of Molecular and Cellular Biochemistry, University of Kentucky, Lexington, Kentucky, United States of America.ORCID 0000-0001-9464-3784
University of Kentucky · USUniversity of Maryland, Baltimore · US

Funding

University of Kentucky Markey Cancer Center Support Grant ECIA SupplementP30CA177558 · NCI · UNIVERSITY OF KENTUCKY · PI Jennifer F Rogers · 2013 to 2026
$38.3M
The Phosphatase PRL3 as a MYC Target and Pro-Survival Oncogene in Acute Lymphoblastic LeukemiaR37CA227656 · NCI · UNIVERSITY OF KENTUCKY · PI BLACKBURN, JESSICA S. · 2018 to 2024
$2.4M
Harnessing Single Cell Technology to Define Self-Renewal in Normal and Malignant Stem CellsDP2CA228043 · NCI · UNIVERSITY OF KENTUCKY · PI BLACKBURN, JESSICA S. · 2017 to 2017
$2.3M
NCI NIH HHS DP2 CA228043NCI NIH HHS P30 CA177558NCI NIH HHS R37 CA227656
6 · The paper itself

Abstract

Phosphatase of Regenerating Liver-3 (PRL-3) is associated with cancer progression and metastasis. The mechanisms that drive PRL-3's oncogenic functions are not well understood, partly due to a lack of research tools available to study this protein. We have begun to address these issues by developing alpaca-derived single domain antibodies, or nanobodies, targeting PRL-3 with a KD of 30-300 nM and no activity towards highly homologous family members PRL-1 and PRL-2. We found that longer and charged N-terminal tags on PRL-3, such as GFP and FLAG, changed PRL-3 localization compared to untagged protein, indicating that the nanobodies may provide new insights into PRL-3 trafficking and function. The nanobodies perform equally, if not better, than commercially available antibodies in immunofluorescence and immunoprecipitation. Finally, hydrogen-deuterium exchange mass spectrometry (HDX-MS) showed that the nanobodies bind partially within the PRL-3 active site and can interfere with PRL-3 phosphatase activity. Co-immunoprecipitation with a known PRL-3 active site binding partner, the CBS domain of metal transporter CNNM3, showed that the nanobodies reduced the amount of PRL-3:CBS inter-action. The potential of blocking this interaction is highly relevant in cancer, as multiple research groups have shown that PRL-3 binding to CNNM proteins is sufficient to promote metastatic growth in mouse models. The anti-PRL-3 nanobodies represent an important expansion of the research tools available to study PRL-3 function and can be used to define the role of PRL-3 in cancer progression.

Indexed as

AntibodiesNeoplasmsSingle-Domain AntibodiesAnimalsCamelids, New WorldDisease Models, AnimalMiceAntibodiesSingle-Domain Antibodies

Identifiers

PMID37220097
PMCPMC10204944
OpenAlexW4377862302

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.