Evidence map›Paper›PMID 37218941›Full record

ArticleTomography (Ann Arbor, Mich.)2023

Co-Clinical Imaging Metadata Information (CIMI) for Cancer Research to Promote Open Science, Standardization, and Reproducibility in Preclinical Imaging.

Stephen M Moore, James D Quirk, Andrew W Lassiter, Richard Laforest, Gregory D Ayers, Cristian T Badea, Andriy Y Fedorov, Paul E Kinahan, Matthew Holbrook, Peder E Z Larson and 17 more

Abstract read
In one paragraph

Article in Tomography (Ann Arbor, Mich.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. The Next Frontier in Quantitative Co-Clinical Imaging to Advance Functional Precision Oncology.Clinical cancer research : an official journal of the American Association for Cancer Research · 2026
    Article
  2. Review
  3. Data Format Standardization and DICOM Integration for HyperpolarizedJournal of imaging informatics in medicine · 2024
    Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors.

Stephen M MooreMallinckrodt Institute of Radiology, Washington University School of Medicine, St. Louis, MO 63110, USA.
James D QuirkMallinckrodt Institute of Radiology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Andrew W LassiterMallinckrodt Institute of Radiology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Richard LaforestMallinckrodt Institute of Radiology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Gregory D AyersDepartment of Biostatistics, Vanderbilt University, Nashville, TN 37235, USA.
Cristian T BadeaQuantitative Imaging and Analysis Lab, Department of Radiology, Duke University, Durham, NC 27708, USA.ORCID 0000-0002-1850-2522
Andriy Y FedorovBrigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA.ORCID 0000-0003-4806-9413
Paul E KinahanDepartment of Radiology, University of Washington, Seattle, WA 98195, USA.
Matthew HolbrookQuantitative Imaging and Analysis Lab, Department of Radiology, Duke University, Durham, NC 27708, USA.ORCID 0000-0002-5832-8725
Peder E Z LarsonDepartment of Radiology and Biomedical Imaging, University of California, San Francisco, CA 94143, USA.ORCID 0000-0003-4183-3634
Renuka SriramDepartment of Radiology and Biomedical Imaging, University of California, San Francisco, CA 94143, USA.ORCID 0000-0003-3505-2479
Thomas L ChenevertDepartment of Radiology, University of Michigan Medical School, Ann Arbor, MI 48109, USA.
Dariya MalyarenkoDepartment of Radiology, University of Michigan Medical School, Ann Arbor, MI 48109, USA.ORCID 0000-0003-0403-1501
John KurhanewiczDepartment of Radiology and Biomedical Imaging, University of California, San Francisco, CA 94143, USA.ORCID 0000-0002-3544-5339
A McGarry HoughtonFred Hutchinson Cancer Center, Seattle, WA 98109, USA.
Brian D RossDepartment of Radiology, University of Michigan Medical School, Ann Arbor, MI 48109, USA.ORCID 0000-0003-2695-9140
Stephen PickupDepartment of Radiology, Abramson Cancer Center, University of Pennsylvania, Philadelphia, PA 19104, USA.
James C GeeDepartment of Radiology, Abramson Cancer Center, University of Pennsylvania, Philadelphia, PA 19104, USA.
Rong ZhouDepartment of Radiology, Abramson Cancer Center, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0003-4018-381X
Seth T GammonDepartment of Cancer Systems Imaging, Division of Diagnostic Imaging, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.ORCID 0000-0001-8647-0975
Henry Charles ManningDepartment of Cancer Systems Imaging, Division of Diagnostic Imaging, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Raheleh RoudiDepartment of Radiology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Heike E Daldrup-LinkDepartment of Radiology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Michael T LewisDan L Duncan Comprehensive Cancer Center, Departments of Molecular and Cellular Biology and Radiology, Baylor College of Medicine, Houston, TX 77030, USA.ORCID 0000-0002-6330-4007
Daniel L RubinDepartments of Biomedical Data Science, Radiology and Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA.ORCID 0000-0001-5057-4369
Thomas E YankeelovDepartments of Biomedical Engineering, Diagnostic Medicine and Oncology, Oden Institute for Computational and Engineering Sciences, Livestrong Cancer Institutes, The University of Texas at Austin, Austin, TX 78712, USA.ORCID 0000-0001-6201-3913
Kooresh I ShoghiMallinckrodt Institute of Radiology, Department of Biomedical Engineering, Siteman Cancer Center, Washington University School of Medicine, St. Louis, MO 63110, USA.

Funding

Washington University Center for Cellular ImagingP30CA091842 · NCI · WASHINGTON UNIVERSITY · PI TIMOTHY J. EBERLEIN · 2001 to 2026
$128.0M
Project 4: Risk stratification for pulmonary nodules detected by CT imaging using plasma and imaging biomarkersP50CA228944 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI PHILIP D GREENBERG · 2019 to 2026
$19.6M
WASHINGTON UNIVERSITY CO-CLINICAL IMAGING RESEARCH RESOURCEU24CA209837 · NCI · WASHINGTON UNIVERSITY · PI Li Ding, Shunqiang Li · 2017 to 2026
$6.3M
Preclinical Imaging XNAT-enabled Informatics (PIXI) CenterU24CA253531 · NCI · WASHINGTON UNIVERSITY · PI Daniel Scott Marcus, Kooresh Isaac Shoghi · 2020 to 2026
$5.1M
Preclinical imaging characterization and resource development of PDX SCNC prostate cancer murine modelsU24CA253377 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KURHANEWICZ, JOHN, PEEHL, DONNA M. · 2020 to 2024
$3.4M
VU PREDICTU24CA220325 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI KOPETZ, SCOTT, MANNING, HENRY CHARLES · 2018 to 2022
$3.3M
Co-Clinical Research Resource for Imaging Tumor Associated MacrophagesU24CA264298 · NCI · STANFORD UNIVERSITY · PI DALDRUP-LINK, HEIKE ELIZABETH, GATIDIS, SERGIOS · 2021 to 2025
$3.2M
INTEGRATING OMICS AND QUANTITATIVE IMAGING DATA IN CO-CLINICAL TRIALS TO PREDICT TREATMENT RESPONSE IN TRIPLE NEGATIVE BREAST CANCERU24CA226110 · NCI · BAYLOR COLLEGE OF MEDICINE · PI LEWIS, MICHAEL T., RUBIN, DANIEL L · 2019 to 2023
$3.2M
University of Michigan Quantitative Co-Clinical Imaging Research ResourceU24CA237683 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CHENEVERT, THOMAS L, LUKER, GARY D · 2019 to 2023
$3.1M
FFNP-PET as a predictive biomarker of response to endocrine therapy approaches in advanced breast cancerR01CA273194 · NCI · WASHINGTON UNIVERSITY · PI DEHDASHTI, FARROKH, MA, CYNTHIA X · 2022 to 2025
$3.1M
Penn Quantitative MRI Resource for Pancreatic CancerU24CA231858 · NCI · UNIVERSITY OF PENNSYLVANIA · PI ODWYER, PETER J, ROSEN, MARK ALAN · 2018 to 2022
$3.0M
A Quantitative PET/CT Research Resource for Co-Clinical Imaging of Lung Cancer TherapiesU24CA264044 · NCI · UNIVERSITY OF WASHINGTON · PI HOUGHTON, A MCGARRY, KINAHAN, PAUL E. · 2021 to 2025
$2.9M
NCI NIH HHS P30 CA091842NCI NIH HHS P50 CA228944NCI NIH HHS R01 CA273194NCI NIH HHS U24 CA209837NCI NIH HHS U24 CA220245NCI NIH HHS U24 CA220325NCI NIH HHS U24 CA226110NCI NIH HHS U24CA226110NCI NIH HHS U24 CA231858NCI NIH HHS U24CA231858NCI NIH HHS U24 CA237683NCI NIH HHS U24CA237683NCI NIH HHS U24 CA253377NCI NIH HHS U24 CA253531NCI NIH HHS U24 CA264044NCI NIH HHS U24 CA264298NIH HHS S10 OD030403
6 · The paper itself

Abstract

Preclinical imaging is a critical component in translational research with significant complexities in workflow and site differences in deployment. Importantly, the National Cancer Institute's (NCI) precision medicine initiative emphasizes the use of translational co-clinical oncology models to address the biological and molecular bases of cancer prevention and treatment. The use of oncology models, such as patient-derived tumor xenografts (PDX) and genetically engineered mouse models (GEMMs), has ushered in an era of co-clinical trials by which preclinical studies can inform clinical trials and protocols, thus bridging the translational divide in cancer research. Similarly, preclinical imaging fills a translational gap as an enabling technology for translational imaging research. Unlike clinical imaging, where equipment manufacturers strive to meet standards in practice at clinical sites, standards are neither fully developed nor implemented in preclinical imaging. This fundamentally limits the collection and reporting of metadata to qualify preclinical imaging studies, thereby hindering open science and impacting the reproducibility of co-clinical imaging research. To begin to address these issues, the NCI co-clinical imaging research program (CIRP) conducted a survey to identify metadata requirements for reproducible quantitative co-clinical imaging. The enclosed consensus-based report summarizes co-clinical imaging metadata information (CIMI) to support quantitative co-clinical imaging research with broad implications for capturing co-clinical data, enabling interoperability and data sharing, as well as potentially leading to updates to the preclinical Digital Imaging and Communications in Medicine (DICOM) standard.

Indexed as

MetadataNeoplasmsAnimalsDiagnostic ImagingHumansMiceReference StandardsReproducibility of Resultsco-clinical imagingDigital Imaging and Communications in Medicine (DICOM)metadataopen sciencepreclinical imagingreproducibilitystandardization

Identifiers

PMID37218941
PMCPMC10204428

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.