Evidence map›Paper›PMID 37217762›Full record

ReviewPsychometrika2023

Comparing Bayesian Variable Selection to Lasso Approaches for Applications in Psychology.

Sierra A Bainter, Thomas G McCauley, Mahmoud M Fahmy, Zachary T Goodman, Lauren B Kupis, J Sunil Rao

Open access · hybridAbstract readReview
In one paragraph

Review in Psychometrika, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Sierra A BainterDepartment of Psychology, University of Miami, 5665 Ponce de Leon Blvd, Coral Gables, FL, 33146, USA. sbainter@miami.edu.ORCID http://orcid.org/0000-0001-7461-0803
Thomas G McCauleyDepartment of Psychology, University of California San Diego, San Diego, USA.
Mahmoud M FahmyDepartment of Industrial Engineering, University of Miami, Coral Gables, USA.
Zachary T GoodmanDepartment of Psychology, University of Miami, 5665 Ponce de Leon Blvd, Coral Gables, FL, 33146, USA.ORCID http://orcid.org/0000-0002-0126-4425
Lauren B KupisDepartment of Psychiatry and Biobehavioral Sciences, University of California Los Angeles, Los Angeles, USA.ORCID http://orcid.org/0000-0002-1720-7580
J Sunil RaoDivision of Biostatistics, University of Miami, Coral Gables, USA.
University of Miami · USUniversity of California, Los Angeles · USUniversity of California San Diego · US

Funding

Bayesian Variable Selection Methods to Accelerate Identification of Important Psychological Predictors and Neural Substrates of PsychopathologyK01MH122805 · NIMH · UNIVERSITY OF MIAMI CORAL GABLES · PI BAINTER, SIERRA · 2020 to 2024
$659k
NIMH NIH HHS K01 MH122805
6 · The paper itself

Abstract

In the current paper, we review existing tools for solving variable selection problems in psychology. Modern regularization methods such as lasso regression have recently been introduced in the field and are incorporated into popular methodologies, such as network analysis. However, several recognized limitations of lasso regularization may limit its suitability for psychological research. In this paper, we compare the properties of lasso approaches used for variable selection to Bayesian variable selection approaches. In particular we highlight advantages of stochastic search variable selection (SSVS), that make it well suited for variable selection applications in psychology. We demonstrate these advantages and contrast SSVS with lasso type penalization in an application to predict depression symptoms in a large sample and an accompanying simulation study. We investigate the effects of sample size, effect size, and patterns of correlation among predictors on rates of correct and false inclusion and bias in the estimates. SSVS as investigated here is reasonably computationally efficient and powerful to detect moderate effects in small sample sizes (or small effects in moderate sample sizes), while protecting against false inclusion and without over-penalizing true effects. We recommend SSVS as a flexible framework that is well-suited for the field, discuss limitations, and suggest directions for future development.

Indexed as

Bayes TheoremComputer SimulationHumansPsychometricsBayesianlassopenalizationregressionshrinkage priorsstochastic search variable selectionvariable selection

Identifiers

PMID37217762
PMCPMC10202760
OpenAlexW4377565525

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.