Evidence map›Paper›PMID 37217238›Full record

ArticleCancer prevention research (Philadelphia, Pa.)2023

Polymorphisms in the Nonhomologous End-joining DNA Repair Pathway are Associated with HPV Integration in Cervical Dysplasia.

Jennifer M Geris, E Susan Amirian, Deborah A Marquez-Do, Martial Guillaud, Laura M Dillon, Michele Follen, Michael E Scheurer

Abstract read
In one paragraph

Article in Cancer prevention research (Philadelphia, Pa.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jennifer M GerisDepartment of Medicine, Baylor College of Medicine, Houston, Texas.ORCID 0000-0001-8710-3691
E Susan AmirianDan L. Duncan Cancer Center, Baylor College of Medicine, Houston, Texas.ORCID 0000-0003-1130-7609
Deborah A Marquez-DoDepartment of Pediatrics, Baylor College of Medicine, Houston, Texas.ORCID 0009-0001-5842-0708
Martial GuillaudDepartment of Cancer Imaging, British Columbia Cancer Research Centre, Vancouver, British Columbia.ORCID 0000-0001-8982-2489
Laura M DillonDepartment of Diagnostic and Biomedical Sciences, UTHealth School of Dentistry, Houston, Texas.ORCID 0009-0005-1540-0431
Michele FollenEmblemHealth, New York, New York.ORCID 0000-0001-9628-9475
Michael E ScheurerDepartment of Medicine, Baylor College of Medicine, Houston, Texas.ORCID 0000-0002-8379-6088

Funding

Technical FeasibilityP01CA082710 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI FOLLEN, MICHELE · 1999 to 2014
$28.7M
Infection and Inflammation in Adult GliomasK07CA131505 · NCI · BAYLOR COLLEGE OF MEDICINE · PI SCHEURER, MICHAEL E. · 2008 to 2012
$784k
Nonhomologous end-joinging polymorphisms and HPV integration in cervical dysplasiR03CA143965 · NCI · BAYLOR COLLEGE OF MEDICINE · PI SCHEURER, MICHAEL E. · 2009 to 2010
$154k
NCI NIH HHS K07 CA131505NCI NIH HHS P01 CA082710NCI NIH HHS R03 CA143965
6 · The paper itself

Abstract

Previous evidence indicates that human papillomavirus (HPV) integration status may be associated with cervical cancer development and progression. However, host genetic variation within genes that may play important roles in the viral integration process is understudied. The aim of this study was to examine the association between HPV16 and HPV18 viral integration status and SNPs in nonhomologous-end-joining (NHEJ) DNA repair pathway genes on cervical dysplasia. Women enrolled in two large trials of optical technologies for cervical cancer detection and positive for HPV16 or HPV18 were selected for HPV integration analysis and genotyping. Associations between SNPs and cytology (normal, low-grade, or high-grade lesions) were evaluated. Among women with cervical dysplasia, polytomous logistic regression models were used to evaluate the effect of each SNP on viral integration status. Of the 710 women evaluated [149 high-grade squamous intraepithelial lesion (HSIL), 251; low-grade squamous intraepithelial lesion (LSIL, 310 normal)], 395 (55.6%) were positive for HPV16 and 192 (27%) were positive for HPV18. Tag-SNPs in 13 DNA repair genes, including RAD50, WRN, and XRCC4, were significantly associated with cervical dysplasia. HPV16 integration status was differential across cervical cytology, but overall, most participants had a mix of both episomal and integrated HPV16. Four tag-SNPs in the XRCC4 gene were found to be significantly associated with HPV16 integration status. Our findings indicate that host genetic variation in NHEJ DNA repair pathway genes, specifically XRCC4, are significantly associated with HPV integration, and that these genes may play an important role in determining cervical cancer development and progression. PREVENTION RELEVANCE: HPV integration in premalignant lesions and is thought to be an important driver of carcinogenesis. However, it is unclear what factors promote integration. The use of targeted genotyping among women presenting with cervical dysplasia has the potential to be an effective tool in assessing the likelihood of progression to cancer.

Indexed as

Papillomavirus InfectionsUterine Cervical DysplasiaUterine Cervical NeoplasmsDNA End-Joining RepairDNA, ViralFemaleHuman papillomavirus 16Human Papillomavirus VirusesHumansPapillomaviridaeDNA, Viral

Identifiers

PMID37217238
PMCPMC10524768

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.