Evidence map›Paper›PMID 37216274›Full record

ArticleeLife2023

APE1 recruits ATRIP to ssDNA in an RPA-dependent and -independent manner to promote the ATR DNA damage response.

Yunfeng Lin, Jia Li, Haichao Zhao, Anne McMahon, Kelly McGhee, Shan Yan

Open access · goldAbstract read
In one paragraph

Article in eLife, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
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  5. Review
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  8. Mechanisms of DNA repair and mutagenesis induced by acetaldehyde, acrolein, aristolochic acids, and vinyl chloride.Journal of environmental science and health. Part C, Toxicology and carcinogenesis · 2025
    Review
  9. Review
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  11. Article
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  16. Review
  17. Maintaining chromosome and genome stability by the RPA-RNF20-SNF2H cascade.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Yunfeng LinDepartment of Biological Sciences, University of North Carolina at Charlotte, Charlotte, United States.
Jia LiDepartment of Biological Sciences, University of North Carolina at Charlotte, Charlotte, United States.
Haichao ZhaoDepartment of Biological Sciences, University of North Carolina at Charlotte, Charlotte, United States.
Anne McMahonDepartment of Biological Sciences, University of North Carolina at Charlotte, Charlotte, United States.
Kelly McGheeDepartment of Biological Sciences, University of North Carolina at Charlotte, Charlotte, United States.
Shan YanDepartment of Biological Sciences, University of North Carolina at Charlotte, Charlotte, United States.ORCID 0000-0001-8106-6295
University of North Carolina at Charlotte · US

Funding

Mechanism of APE1 in DNA damage responseR01CA225637 · NCI · UNIVERSITY OF NORTH CAROLINA CHARLOTTE · PI YAN, SHAN · 2018 to 2022
$1.9M
ATM activation by DNA single-strand breaksR21ES032966 · NIEHS · UNIVERSITY OF NORTH CAROLINA CHARLOTTE · PI YAN, SHAN · 2021 to 2022
$415k
Mechanism of APE2 in genome integrityR03CA270663 · NCI · UNIVERSITY OF NORTH CAROLINA CHARLOTTE · PI YAN, SHAN · 2023 to 2024
$149k
NCI NIH HHS R01 CA225637NCI NIH HHS R03 CA270663NIEHS NIH HHS R21 ES032966
6 · The paper itself

Abstract

Cells have evolved the DNA damage response (DDR) pathways in response to DNA replication stress or DNA damage. In the ATR-Chk1 DDR pathway, it has been proposed that ATR is recruited to RPA-coated single-stranded DNA (ssDNA) by direct ATRIP-RPA interaction. However, it remains elusive how ATRIP is recruited to ssDNA in an RPA-independent manner. Here, we provide evidence that APE1 directly associates ssDNA to recruit ATRIP onto ssDNA in an RPA-independent fashion. The N-terminal motif within APE1 is required and sufficient for the APE1-ATRIP interaction in vitro and the distinct APE1-ATRIP interaction is required for ATRIP recruitment to ssDNA and the ATR-Chk1 DDR pathway activation in

Indexed as

DNA, Single-StrandedReplication Protein AAtaxia Telangiectasia Mutated ProteinsCell Cycle ProteinsDNA DamageDNA ReplicationPhosphorylationAtaxia Telangiectasia Mutated ProteinsCell Cycle ProteinsDNA, Single-StrandedReplication Protein AAPE1ATRATRIPbiochemistrychemical biologychromosomesDDRgene expressionRPAssDNAxenopus

Identifiers

PMID37216274
PMCPMC10202453
OpenAlexW4377294887

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.