Evidence map›Paper›PMID 37215034›Full record

ArticlebioRxiv : the preprint server for biology2023

RNA polymerase II pausing is essential during spermatogenesis for appropriate gene expression and completion of meiosis.

Emily G Kaye, Geoffrey M Nelson, Helena D Zomer, Debarun Roy, Irene Infancy Joseph, Karen Adelman, Prabhakara P Reddi

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 6 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Emily G KayeDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, Massachusetts 02115, USA.
Geoffrey M NelsonDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, Massachusetts 02115, USA.
Helena D ZomerDepartment of Comparative Biosciences, University of Illinois Urbana-Champaign, Urbana, Illinois, 61802, USA.
Debarun RoyDepartment of Comparative Biosciences, University of Illinois Urbana-Champaign, Urbana, Illinois, 61802, USA.
Irene Infancy JosephDepartment of Comparative Biosciences, University of Illinois Urbana-Champaign, Urbana, Illinois, 61802, USA.
Karen AdelmanDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, Massachusetts 02115, USA.
Prabhakara P ReddiDepartment of Comparative Biosciences, University of Illinois Urbana-Champaign, Urbana, Illinois, 61802, USA.
University of Illinois Urbana-Champaign · USHarvard University · US

Funding

RNA Pol II Pausing is Critical for Spermatogenesis and Male FertilityR01HD094546 · NICHD · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI REDDI, PRABHAKARA P · 2018 to 2022
$1.7M
NICHD NIH HHS R01 HD094546
6 · The paper itself

Abstract

Male germ cell development requires precise regulation of gene activity in a cell-type and stage-specific manner, with perturbations in gene expression during spermatogenesis associated with infertility. Here, we use steady-state, nascent and single-cell RNA sequencing strategies to comprehensively characterize gene expression across male germ cell populations, to dissect the mechanisms of gene control and provide new insights towards therapy. We discover a requirement for pausing of RNA Polymerase II (Pol II) at the earliest stages of sperm differentiation to establish the landscape of gene activity across development. Accordingly, genetic knockout of the Pol II pause-inducing factor NELF in immature germ cells blocks differentiation to mature spermatids. Further, we uncover unanticipated roles for Pol II pausing in the regulation of meiosis during spermatogenesis, with the presence of paused Pol II associated with double strand break formation by SPO11, and disruption of SPO11 expression in germ cells lacking NELF.

Identifiers

PMID37215034
PMCPMC10197597
OpenAlexW4376112247

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.