Evidence map›Paper›PMID 37214971›Full record

ArticlebioRxiv : the preprint server for biology2023

Detection of a geminate photoproduct of bovine cytochrome c oxidase by time-resolved serial femtosecond crystallography.

Izumi Ishigami, Sergio Carbajo, Nadia Zatsepin, Masahide Hikita, Chelsie E Conrad, Garrett Nelson, Jesse Coe, Shibom Basu, Thomas Grant, Matthew H Seaberg and 6 more

Abstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors.

Izumi IshigamiDepartment of Biochemistry, Albert Einstein College of Medicine, Bronx, NY, 10461, USA.
Sergio CarbajoLinac Coherent Light Source, SLAC National Accelerator Laboratory, Menlo Park. CA, 94025, USA.
Nadia ZatsepinDepartment of Physics, Arizona State University, Tempe, AZ 85287, USA.
Masahide HikitaDepartment of Biochemistry, Albert Einstein College of Medicine, Bronx, NY, 10461, USA.
Chelsie E ConradCenter for Applied Structural Discovery, The Biodesign Institute, Arizona State University, Tempe, AZ, 85287, USA.
Garrett NelsonDepartment of Physics, Arizona State University, Tempe, AZ 85287, USA.
Jesse CoeCenter for Applied Structural Discovery, The Biodesign Institute, Arizona State University, Tempe, AZ, 85287, USA.
Shibom BasuCenter for Applied Structural Discovery, The Biodesign Institute, Arizona State University, Tempe, AZ, 85287, USA.
Thomas GrantDepartment of Structural Biology, University Buffalo, 955 Main Street, Buffalo, New York 14203, USA.
Matthew H SeabergLinac Coherent Light Source, SLAC National Accelerator Laboratory, Menlo Park. CA, 94025, USA.
Raymond G SierraLinac Coherent Light Source, SLAC National Accelerator Laboratory, Menlo Park. CA, 94025, USA.
Mark S HunterLinac Coherent Light Source, SLAC National Accelerator Laboratory, Menlo Park. CA, 94025, USA.
Petra FrommeCenter for Applied Structural Discovery, The Biodesign Institute, Arizona State University, Tempe, AZ, 85287, USA.
Raimund FrommeCenter for Applied Structural Discovery, The Biodesign Institute, Arizona State University, Tempe, AZ, 85287, USA.
Denis L RousseauDepartment of Biochemistry, Albert Einstein College of Medicine, Bronx, NY, 10461, USA.
Syun-Ru YehDepartment of Biochemistry, Albert Einstein College of Medicine, Bronx, NY, 10461, USA.

Funding

ZWITTERION SURFACTANT DDMAB FOR IMPROV STABIL OF PROTEINP41RR001209 · NCRR · STANFORD UNIVERSITY · PI GONZALEZ, ANA M · 1985 to 2011
$38.9M
X-ray Absorption Spectroscopy (XAS) pp.711-759P41GM103393 · NIGMS · STANFORD UNIVERSITY · PI HODGSON, KEITH O · 2012 to 2019
$30.6M
Structural Dynamics at LCLSP41GM139687 · NIGMS · STANFORD UNIVERSITY · PI BOUTET, SEBASTIEN · 2021 to 2025
$7.5M
Femtosecond nano-crystallography of membrane proteinsR01GM095583 · NIGMS · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI FROMME, PETRA · 2010 to 2023
$4.3M
Structure and Function of Heme-based DioxygenasesR01GM115773 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI YEH, SYUN-RU · 2016 to 2023
$3.3M
Structures of time-resolved intermediates in cytochrome c oxidase obtained by serial femtosecond crystallographyR01GM126297 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI DENIS L. ROUSSEAU · 2017 to 2026
$3.2M
High-end X-ray Detector System for Femtosecond CrystallographyS10OD023453 · OD · STANFORD UNIVERSITY · PI BOUTET, SEBASTIEN · 2017 to 2017
$1.7M
NCRR NIH HHS P41 RR001209NIGMS NIH HHS P41 GM103393NIGMS NIH HHS P41 GM139687NIGMS NIH HHS R01 GM095583NIGMS NIH HHS R01 GM115773NIGMS NIH HHS R01 GM126297NIH HHS S10 OD023453
6 · The paper itself

Abstract

Cytochrome

Identifiers

PMID37214971
PMCPMC10197551

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.