Evidence map›Paper›PMID 37214090›Full record

ArticlePeerJ2023

Impact of mini-driver genes in the prognosis and tumor features of colorectal cancer samples: a novel perspective to support current biomarkers.

Anthony Vladimir Campos Segura, Mariana Belén Velásquez Sotomayor, Ana Isabel Flor Gutiérrez Román, César Alexander Ortiz Rojas, Alexis Germán Murillo Carrasco

Open access · goldAbstract read
In one paragraph

Article in PeerJ, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

  1. An Integrative Variant Scoring Function for Finding Novel Genes Associated with Ovarian and Thyroid Cancer.International journal of environmental research and public health · 2026
    Article
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  4. Review
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  6. NovelInternational journal of molecular sciences · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Anthony Vladimir Campos SeguraBiochemistry and Molecular Biology Research Laboratory. Faculty of Natural Sciences and Mathematics, Universidad Nacional Federico Villarreal, Lima, Peru.ORCID 0000-0002-5412-3191
Mariana Belén Velásquez SotomayorResearch Group in Immunology and Cancer (IMMUCA), Lima, Peru.
Ana Isabel Flor Gutiérrez RománBiochemistry and Molecular Biology Research Laboratory. Faculty of Natural Sciences and Mathematics, Universidad Nacional Federico Villarreal, Lima, Peru.
César Alexander Ortiz RojasResearch Group in Immunology and Cancer (IMMUCA), Lima, Peru.
Alexis Germán Murillo CarrascoResearch Group in Immunology and Cancer (IMMUCA), Lima, Peru.ORCID 0000-0002-7372-2608
Federico Villarreal National University · PEUniversidade de São Paulo · BRUniversidad Científica del Sur · PE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Colorectal cancer (CRC) is the second leading cause of cancer-related deaths, and its development is associated with the gains and/or losses of genetic material, which leads to the emergence of main driver genes with higher mutational frequency. In addition, there are other genes with mutations that have weak tumor-promoting effects, known as mini-drivers, which could aggravate the development of oncogenesis when they occur together. The aim of our work was to use computer analysis to explore the survival impact, frequency, and incidence of mutations of possible mini-driver genes to be used for the prognosis of CRC. Methods: We retrieved data from three sources of CRC samples using the cBioPortal platform and analyzed the mutational frequency to exclude genes with driver features and those mutated in less than 5% of the original cohort. We also observed that the mutational profile of these mini-driver candidates is associated with variations in the expression levels. The candidate genes obtained were subjected to Kaplan-Meier curve analysis, making a comparison between mutated and wild-type samples for each gene using a Results: After gene filtering by mutational frequency, we obtained 159 genes of which 60 were associated with a high accumulation of total somatic mutations with Log Conclusion: Our study suggests that the identification and incorporation of mini-driver genes in addition to known driver genes could enhance the accuracy of prognostic biomarkers for CRC.

Indexed as

Colorectal NeoplasmsMicroRNAsBiomarkers, TumorGuanine Nucleotide Exchange FactorsHumansMutationMutation RateNerve Tissue ProteinsPrognosisBiomarkers, TumorDOCK3 protein, humanGuanine Nucleotide Exchange FactorsMicroRNAsMIRN218 microRNA, humanNerve Tissue ProteinsBioinformaticsColorectal cancerGene expressionMini-driver genesMolecular biologyMutational profile

Identifiers

PMID37214090
PMCPMC10198153
OpenAlexW4376645320

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.