Evidence map›Paper›PMID 37212702›Full record

ArticleJournal of clinical microbiology2023

An Overview of 10 Years of Activity of a Molecular Laboratory for Buruli Ulcer Diagnosis at a Field Hospital in Benin.

Faraj Fajloun, Line Ganlonon, Ronald Sètondji Gnimavo, Espoir Sodjinou, Akimath Habib, Eric Claco, Irvine Agoundoté, Ambroise Adeye, Perrin Catraye, Charbel Al-Bayssari and 10 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 4 institutions in 3 countries.

Faraj Fajloun *Universitaire Angers, Nantes Université, CHU Angers, Inserm, INCIT, Angers, France.
Line Ganlonon *Centre de Dépistage et de Traitement de l'Ulcère de Buruli, Fondation Raoul Follereau, Pobè, Benin.
Ronald Sètondji GnimavoCentre de Dépistage et de Traitement de l'Ulcère de Buruli, Fondation Raoul Follereau, Pobè, Benin.
Espoir SodjinouCentre de Dépistage et de Traitement de l'Ulcère de Buruli, Fondation Raoul Follereau, Pobè, Benin.
Akimath HabibCentre de Dépistage et de Traitement de l'Ulcère de Buruli, Fondation Raoul Follereau, Pobè, Benin.
Eric ClacoCentre de Dépistage et de Traitement de l'Ulcère de Buruli, Fondation Raoul Follereau, Pobè, Benin.
Irvine AgoundotéCentre de Dépistage et de Traitement de l'Ulcère de Buruli, Fondation Raoul Follereau, Pobè, Benin.
Ambroise AdeyeCentre de Dépistage et de Traitement de l'Ulcère de Buruli, Fondation Raoul Follereau, Pobè, Benin.
Perrin CatrayeCentre de Dépistage et de Traitement de l'Ulcère de Buruli, Fondation Raoul Follereau, Pobè, Benin.
Charbel Al-BayssariDepartment of Medical Laboratory Sciences, Faculty of Health Sciences, University of Balamand, Tripoli, Lebanon.
Elie Hajj MoussaLaboratoire d'Innovation Thérapeutique, Faculté de Sciences 2, Fanar, Lebanon.
Marie Robbe-SauleUniversitaire Angers, Nantes Université, CHU Angers, Inserm, INCIT, Angers, France.
Jean Gabin HouezoProgramme National de Lutte contre L'Ulcère de Buruli et la Lèpre, Cotonou, Benin.
Godwin Gérard KpotonProgramme National de Lutte contre L'Ulcère de Buruli et la Lèpre, Cotonou, Benin.
Adjimon Gilbert AyéloProgramme National de Lutte contre L'Ulcère de Buruli et la Lèpre, Cotonou, Benin.
Beatriz GomezFondation Anesvad Bilbao, Bilbao, Spain.
Roch Christian JohnsonFondation Raoul Follereau, Health Department, Paris, France.
Laurent MarsollierUniversitaire Angers, Nantes Université, CHU Angers, Inserm, INCIT, Angers, France.
Estelle Marion *Universitaire Angers, Nantes Université, CHU Angers, Inserm, INCIT, Angers, France.
Marie Kempf *Universitaire Angers, Nantes Université, CHU Angers, Inserm, INCIT, Angers, France.ORCID 0000-0002-2943-7500
Inserm · FRProgamme National Contre le Tuberculose · BJUniversité d'Abomey-Calavi · BJUniversity of Balamand · LB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Buruli ulcer (BU) is a neglected tropical disease caused by Mycobacterium ulcerans. Early diagnosis is crucial to prevent morbidity. In November 2012, a field laboratory fully equipped for the rapid on-site quantitative PCR (qPCR) diagnosis of M. ulcerans was established at the Buruli ulcer treatment center (CDTLUB) center in Pobè Benin, a region where BU is endemic. We describe its first 10 years of activity and its gradual evolution into an expert laboratory for BU diagnosis. From 2012 to 2022, the laboratory analyzed 3,018 samples from patients attending consultations for suspected BU at the CDTLUB in Pobè. Ziehl-Neelsen staining and qPCR targeting the IS2404 sequence were performed. Since 2019, the laboratory has also received and analyzed 570 samples from other centers. The laboratory confirmed the diagnosis of BU by qPCR for 39.7% samples: M. ulcerans DNA was detected in 34.7% of swabs, 47.2% of all fine needle aspiration samples (FNA) and 44.6% of all skin biopsy specimens. Positive Ziehl-Neelsen staining results were obtained for 19.0% samples. Bacterial load, estimated by qPCR, was significantly greater for the Ziehl-Neelsen-positive samples than for Ziehl-Neelsen-negative samples, and detection rates were highest for FNA samples. Overall, 26.3% of the samples received from other centers were positive for BU. Most of these samples were sent by the CDTLUBs of Lalo, Allada, and Zagnanado, Benin. The establishment of the laboratory in the CDTLUB of Pobè has been a huge success. Optimal patient care depends on the close proximity of a molecular biology structure to BU treatment centers. Finally, FNA should be promoted among caregivers.

Indexed as

Buruli UlcerMycobacterium ulceransBeninColoring AgentsHumansMobile Health UnitsPolymerase Chain ReactionColoring AgentsBeninBuruli ulcerdiagnosismolecular biology laboratoryMycobacterium ulceransPCR

Identifiers

PMID37212702
PMCPMC10281091
OpenAlexW4377220685

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.