Evidence map›Paper›PMID 37209314›Full record

ArticleFunctional & integrative genomics2023

Bioinformatic and functional analysis of OsDHN2 under cadmium stress.

Wen-Jun Jiang, Meng-Ting Wang, Zhi-Ye Du, Jia-Hao Li, Yang Shi, Xin Wang, Long-Ying Wu, Ji Chen, Min Zhong, Ju Yang and 2 more

Abstract read
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In one paragraph

Article in Functional & integrative genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.8field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Wen-Jun JiangCollege of Ecology and Environment, Chengdu University of Technology, Chengdu, 610059, Sichuan, China.
Meng-Ting WangCollege of Ecology and Environment, Chengdu University of Technology, Chengdu, 610059, Sichuan, China.
Zhi-Ye DuCollege of Ecology and Environment, Chengdu University of Technology, Chengdu, 610059, Sichuan, China.
Jia-Hao LiCollege of Ecology and Environment, Chengdu University of Technology, Chengdu, 610059, Sichuan, China.
Yang ShiCollege of Ecology and Environment, Chengdu University of Technology, Chengdu, 610059, Sichuan, China.
Xin WangCollege of Ecology and Environment, Chengdu University of Technology, Chengdu, 610059, Sichuan, China.
Long-Ying WuCollege of Ecology and Environment, Chengdu University of Technology, Chengdu, 610059, Sichuan, China.
Ji ChenCollege of Agronomy, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China. jichen@sicau.edu.cn.
Min ZhongCollege of Ecology and Environment, Chengdu University of Technology, Chengdu, 610059, Sichuan, China.
Ju YangCollege of Ecology and Environment, Chengdu University of Technology, Chengdu, 610059, Sichuan, China.
Bin-Hua HuInstitute of Biotechnology and Nuclear Technology, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, Sichuan, China.
Jin HuangCollege of Ecology and Environment, Chengdu University of Technology, Chengdu, 610059, Sichuan, China. huangjin18@cdut.edu.cn.
Chengdu University of Technology · CNSichuan Academy of Agricultural Sciences · CNSichuan Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

As a toxic heavy metal, cadmium (Cd) is one of the principal pollutants influencing rice productivity and food security. Despite several studies, the underlying mechanism of Cd response in plants remains largely unclear. Dehydrins are part of the late embryogenesis abundant (LEA) family which protect plants against abiotic stresses. In this study, a Cd-responsive LEA gene, OsDHN2, was functionally characterized. The chromosome localization results indicated that OsDHN2 was located on chromosome 2 of rice. Meanwhile, cis-acting elements, such as MBS (MYB binding site involved in drought-inducibility), ARE (anaerobic induction), and ABRE (abscisic acid), were present in the OsDHN2 promoter region. Expression pattern analysis also showed that OsDHN2 expression was induced in both roots and shoots under Cd stress. Overexpression of OsDHN2 improved Cd tolerance and reduced Cd concentration in yeast. Moreover, increased expression levels of SOD1, CTA1, GSH1, or CTT1 were found in transgenic yeast under Cd stress, suggesting the increased antioxidant enzymatic activities. These results suggested that OsDHN2 is a Cd-responsive gene that has the potential to improve resistance to Cd in rice.

Indexed as

CadmiumOryzaComputational BiologyGene Expression Regulation, PlantPlant ProteinsSaccharomyces cerevisiaeCadmiumPlant ProteinsCadmium toleranceOsDHN2RiceYeast

Identifiers

PMID37209314
OpenAlexW4377138193

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.