Evidence map›Paper›PMID 37208428›Full record

ArticleCommunications biology2023

Predicting 3D soft tissue dynamics from 2D imaging using physics informed neural networks.

Mohammadreza Movahhedi, Xin-Yang Liu, Biao Geng, Coen Elemans, Qian Xue, Jian-Xun Wang, Xudong Zheng

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. From PINNs to PIKANs: recent advances in physics-informed machine learning.Machine learning for computational science and engineering · 2025
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Mohammadreza Movahhedi *Mechanical Engineering Department, University of Maine, Orono, ME, 04469, USA.
Xin-Yang Liu *Aerospace and Mechanical Engineering Department, University of Notre Dame, Notre Dame, IN, 46556, USA.ORCID 0000-0003-1423-605X
Biao GengMechanical Engineering Department, University of Maine, Orono, ME, 04469, USA.
Coen ElemansDepartment of Biology, University of Southern Denmark, Odense M, 5230, Denmark.
Qian XueMechanical Engineering Department, University of Maine, Orono, ME, 04469, USA.ORCID 0000-0002-8462-1271
Jian-Xun WangAerospace and Mechanical Engineering Department, University of Notre Dame, Notre Dame, IN, 46556, USA. jwang33@nd.edu.ORCID 0000-0002-9030-1733
Xudong ZhengMechanical Engineering Department, University of Maine, Orono, ME, 04469, USA. xxzeme@rit.edu.ORCID 0000-0001-5403-8862
Rochester Institute of Technology · USUniversity of Notre Dame · USUniversity of Maine · USUniversity of Southern Denmark · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tissue dynamics play critical roles in many physiological functions and provide important metrics for clinical diagnosis. Capturing real-time high-resolution 3D images of tissue dynamics, however, remains a challenge. This study presents a hybrid physics-informed neural network algorithm that infers 3D flow-induced tissue dynamics and other physical quantities from sparse 2D images. The algorithm combines a recurrent neural network model of soft tissue with a differentiable fluid solver, leveraging prior knowledge in solid mechanics to project the governing equation on a discrete eigen space. The algorithm uses a Long-short-term memory-based recurrent encoder-decoder connected with a fully connected neural network to capture the temporal dependence of flow-structure-interaction. The effectiveness and merit of the proposed algorithm is demonstrated on synthetic data from a canine vocal fold model and experimental data from excised pigeon syringes. The results showed that the algorithm accurately reconstructs 3D vocal dynamics, aerodynamics, and acoustics from sparse 2D vibration profiles.

Indexed as

Neural Networks, ComputerVocal CordsAlgorithmsAnimalsDogsImaging, Three-DimensionalPhysics

Identifiers

PMID37208428
PMCPMC10199019
OpenAlexW4377097882

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.