Evidence map›Paper›PMID 37208401›Full record

ArticleScientific data2023

VegAnn, Vegetation Annotation of multi-crop RGB images acquired under diverse conditions for segmentation.

Simon Madec, Kamran Irfan, Kaaviya Velumani, Frederic Baret, Etienne David, Gaetan Daubige, Lucas Bernigaud Samatan, Mario Serouart, Daniel Smith, Chrisbin James and 5 more

Abstract readDataset
In one paragraph

Article in Scientific data, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Simon MadecUMR TETIS, CIRAD, Montpellier, France. simon.madec@cirad.fr.ORCID 0000-0002-5367-184X
Kamran IrfanINRAE, Avignon Université, UMR EMMAH 1114, 84000, Avignon, France.ORCID 0000-0001-7304-9049
Kaaviya VelumaniINRAE, Avignon Université, UMR EMMAH 1114, 84000, Avignon, France.
Frederic BaretINRAE, Avignon Université, UMR EMMAH 1114, 84000, Avignon, France.
Etienne DavidINRAE, Avignon Université, UMR EMMAH 1114, 84000, Avignon, France.
Gaetan DaubigeArvalis, 228, route de l'Aérodrome - CS 40509, 84914, Avignon, Cedex 9, France.
Lucas Bernigaud SamatanArvalis, 228, route de l'Aérodrome - CS 40509, 84914, Avignon, Cedex 9, France.
Mario SerouartINRAE, Avignon Université, UMR EMMAH 1114, 84000, Avignon, France.
Daniel SmithThe University of Queensland, School of Agriculture and Food Sciences, Gatton, QLD, 4343, Australia.
Chrisbin JamesThe University of Queensland, School of Agriculture and Food Sciences, Gatton, QLD, 4343, Australia.ORCID 0000-0002-0744-0952
Fernando CamachoEOLAB, c/Savina,8.A4, 46980, Valencia, Spain.
Wei GuoGraduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 188-0002, Japan.ORCID 0000-0002-3017-5464
Benoit De SolanArvalis, 228, route de l'Aérodrome - CS 40509, 84914, Avignon, Cedex 9, France.
Scott C ChapmanThe University of Queensland, School of Agriculture and Food Sciences, Gatton, QLD, 4343, Australia.ORCID 0000-0003-4732-8452
Marie WeissINRAE, Avignon Université, UMR EMMAH 1114, 84000, Avignon, France.ORCID 0000-0002-2341-667X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Applying deep learning to images of cropping systems provides new knowledge and insights in research and commercial applications. Semantic segmentation or pixel-wise classification, of RGB images acquired at the ground level, into vegetation and background is a critical step in the estimation of several canopy traits. Current state of the art methodologies based on convolutional neural networks (CNNs) are trained on datasets acquired under controlled or indoor environments. These models are unable to generalize to real-world images and hence need to be fine-tuned using new labelled datasets. This motivated the creation of the VegAnn - Vegetation Annotation - dataset, a collection of 3775 multi-crop RGB images acquired for different phenological stages using different systems and platforms in diverse illumination conditions. We anticipate that VegAnn will help improving segmentation algorithm performances, facilitate benchmarking and promote large-scale crop vegetation segmentation research.

Identifiers

PMID37208401
PMCPMC10199053

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.