Evidence map›Paper›PMID 37206111›Full record

ArticleBiodiversity data journal2023

Another crack in the Dark Taxa wall: a custom DNA barcoding protocol for the species-rich and common Eurytomidae (Hymenoptera, Chalcidoidea).

Samin Jafari, Björn Müller, Björn Rulik, Vera Rduch, Ralph S Peters

Abstract read
In one paragraph

Article in Biodiversity data journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
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  4. New evidence on the identity of the EuropeanBiodiversity data journal · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Samin JafariLeibniz Institute for the Analysis of Biodiversity Change (LIB), Zoological Research Museum Alexander Koenig (zfmk), Arthropoda Department, Adenauerallee 127, D-53113, Bonn, Germany Leibniz Institute for the Analysis of Biodiversity Change (LIB), Zoological Research Museum Alexander Koenig (zfmk), Arthropoda Department, Adenauerallee 127, D-53113 Bonn Germany.
Björn MüllerLeibniz Institute for the Analysis of Biodiversity Change (LIB), Zoological Research Museum Alexander Koenig (zfmk), Arthropoda Department, Adenauerallee 127, D-53113, Bonn, Germany Leibniz Institute for the Analysis of Biodiversity Change (LIB), Zoological Research Museum Alexander Koenig (zfmk), Arthropoda Department, Adenauerallee 127, D-53113 Bonn Germany.ORCID https://orcid.org/0000-0001-6233-5410
Björn RulikLeibniz Institute for the Analysis of Biodiversity Change (LIB), Zoological Research Museum Alexander Koenig (zfmk), Arthropoda Department, Adenauerallee 127, D-53113, Bonn, Germany Leibniz Institute for the Analysis of Biodiversity Change (LIB), Zoological Research Museum Alexander Koenig (zfmk), Arthropoda Department, Adenauerallee 127, D-53113 Bonn Germany.ORCID https://orcid.org/0000-0002-2808-9305
Vera RduchLeibniz Institute for the Analysis of Biodiversity Change (LIB), Zoological Research Museum Alexander Koenig (zfmk), Arthropoda Department, Adenauerallee 127, D-53113, Bonn, Germany Leibniz Institute for the Analysis of Biodiversity Change (LIB), Zoological Research Museum Alexander Koenig (zfmk), Arthropoda Department, Adenauerallee 127, D-53113 Bonn Germany.
Ralph S PetersLeibniz Institute for the Analysis of Biodiversity Change (LIB), Zoological Research Museum Alexander Koenig (zfmk), Arthropoda Department, Adenauerallee 127, D-53113, Bonn, Germany Leibniz Institute for the Analysis of Biodiversity Change (LIB), Zoological Research Museum Alexander Koenig (zfmk), Arthropoda Department, Adenauerallee 127, D-53113 Bonn Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA barcodes are a great tool for accelerated species identification and for complementing species delimitation. Furthermore, DNA barcode reference libraries are the decisive backbone feature for any metabarcoding study in biodiversity monitoring, conservation or ecology. However, in some taxa, DNA barcodes cannot be generated with published primers at a satisfying success rate and these groups will consequently be largely missing from any barcoding-based species list. Here, we provide a custom DNA barcoding forward primer for the Eurytomidae (Hymenoptera, Chalcidoidea), elevating the success rate of high-quality DNA barcodes from 33% to 88%. Eurytomidae is a severely understudied, taxonomically challenging, species-rich group of primarily parasitoid wasps. High species numbers, diverse ecological roles and widespread and common presence identify Eurytomidae as one of many crucial families in terrestrial ecosystems. It is now possible to include Eurytomidae when studying and monitoring the terrestrial fauna, highlighting that barcoding-based approaches will need to routinely use different primers to avoid biases in their data and inferences. The new DNA barcoding protocol is also a prerequisite for our integrative taxonomy study of the group, aiming at delimiting and characterising Central European species and filling the GBOL (German Barcode Of Life) DNA barcode reference library with species-named and voucher-linked sequences.

Indexed as

barcodingCOICOI primerEurytomidaeGBOLIII: Dark TaxaPCR

Identifiers

PMID37206111
PMCPMC10189536

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.