Evidence map›Paper›PMID 37205711›Full record

ArticlePLoS biology2023

Single-cell atlas of the human neonatal small intestine affected by necrotizing enterocolitis.

Adi Egozi, Oluwabunmi Olaloye, Lael Werner, Tatiana Silva, Blake McCourt, Richard W Pierce, Xiaojing An, Fujing Wang, Kong Chen, Jordan S Pober and 3 more

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Necrotizing enterocolitis.Nature reviews. Disease primers · 2026
    Review
  7. Article
  8. Article
  9. Article
  10. Time-dependent Amino Acid Crosstalk Shapes Macrophage Responses in Necrotizing Enterocolitis.Cellular and molecular gastroenterology and hepatology · 2026
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Necrotizing Enterocolitis: What's New and What's Next?International journal of molecular sciences · 2025
    Review
  17. Article
  18. Article
  19. Article
  20. Present and future of microbiome-targeting therapeutics.The Journal of clinical investigation · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Adi EgoziDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel.
Oluwabunmi OlaloyeDepartment of Pediatrics, Yale School of Medicine, New Haven, Connecticut, United States of America.
Lael WernerInstitute of Gastroenterology, Nutrition and Liver Diseases, Schneider Children's Medical Center of Israel, Petah Tikva, Israel, affiliated to the Faculty of Medicine, Tel Aviv University, Tel Aviv, Israel.
Tatiana SilvaDepartment of Pediatrics, Yale School of Medicine, New Haven, Connecticut, United States of America.
Blake McCourtDepartment of Pediatrics, Yale School of Medicine, New Haven, Connecticut, United States of America.
Richard W PierceDepartment of Pediatrics, Yale School of Medicine, New Haven, Connecticut, United States of America.
Xiaojing AnDepartment of Medicine, University of Pittsburgh Medical Center Montefiore Hospital, Pittsburgh, Pennsylvania, United States of America.
Fujing WangDepartment of Medicine, University of Pittsburgh Medical Center Montefiore Hospital, Pittsburgh, Pennsylvania, United States of America.
Kong ChenDepartment of Medicine, University of Pittsburgh Medical Center Montefiore Hospital, Pittsburgh, Pennsylvania, United States of America.
Jordan S PoberProgram in Human and Translational Immunology, Yale School of Medicine, New Haven, Connecticut, United States of America.
Dror ShouvalInstitute of Gastroenterology, Nutrition and Liver Diseases, Schneider Children's Medical Center of Israel, Petah Tikva, Israel, affiliated to the Faculty of Medicine, Tel Aviv University, Tel Aviv, Israel.
Shalev ItzkovitzDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel.ORCID 0000-0003-0685-2522
Liza KonnikovaDepartment of Pediatrics, Yale School of Medicine, New Haven, Connecticut, United States of America.ORCID 0000-0003-4804-5497
Yale University · USUniversity of Pittsburgh Medical Center · USTel Aviv University · ILWeizmann Institute of Science · IL

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Institutional Career Development CoreKL2TR001862 · NCATS · YALE UNIVERSITY · PI CANTLEY, LLOYD G, EDELMAN, E. JENNIFER · 2016 to 2025
$12.2M
Function of T cells at the Maternal-Fetal InterfaceR01AI171980 · NIAID · YALE UNIVERSITY · PI Liza Konnikova · 2022 to 2026
$3.5M
Repurposing Pharmacological Agents for Inherited Mast CellDisorders of the GutR21TR002639 · NCATS · YALE UNIVERSITY · PI GLOVER, SARAH C, HAMILTON, MATTHEW J · 2019 to 2020
$535k
Peripheral Immune Development in Premature Infants with and without NECR21HD102565 · NICHD · YALE UNIVERSITY · PI KONNIKOVA, LIZA, TSENG, GEORGE C. · 2020 to 2021
$456k
NCATS NIH HHS KL2 TR001862NCATS NIH HHS R21 TR002639NCATS NIH HHS UL1 TR001863NIAID NIH HHS R01 AI171980NICHD NIH HHS L40 HD110364NICHD NIH HHS R21 HD102565
6 · The paper itself

Abstract

Necrotizing enterocolitis (NEC) is a gastrointestinal complication of premature infants with high rates of morbidity and mortality. A comprehensive view of the cellular changes and aberrant interactions that underlie NEC is lacking. This study aimed at filling in this gap. We combine single-cell RNA sequencing (scRNAseq), T-cell receptor beta (TCRβ) analysis, bulk transcriptomics, and imaging to characterize cell identities, interactions, and zonal changes in NEC. We find an abundance of proinflammatory macrophages, fibroblasts, endothelial cells as well as T cells that exhibit increased TCRβ clonal expansion. Villus tip epithelial cells are reduced in NEC and the remaining epithelial cells up-regulate proinflammatory genes. We establish a detailed map of aberrant epithelial-mesenchymal-immune interactions that are associated with inflammation in NEC mucosa. Our analyses highlight the cellular dysregulations of NEC-associated intestinal tissue and identify potential targets for biomarker discovery and therapeutics.

Indexed as

Enterocolitis, NecrotizingEndothelial CellsHumansInfantInfant, NewbornInfant, PrematureIntestinal MucosaIntestinesIntestine, Small

Identifiers

PMID37205711
PMCPMC10234541
OpenAlexW4377116114

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.