Evidence map›Paper›PMID 37205694›Full record

ArticlePloS one2023

PCNA Ser46-Leu47 residues are crucial in preserving genomic integrity.

Sangin Kim, Yeongjae Kim, Youyoung Kim, Suhyeon Yoon, Kyoo-Young Lee, Yoonsung Lee, Sukhyun Kang, Kyungjae Myung, Chang-Kyu Oh

Abstract read
In one paragraph

Article in PloS one, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Sangin KimInstitute for Basic Science, Center for Genomic Integrity, Ulsan, Korea.ORCID 0000-0003-3961-6083
Yeongjae KimInstitute for Basic Science, Center for Genomic Integrity, Ulsan, Korea.ORCID 0000-0002-5676-294X
Youyoung KimInstitute for Basic Science, Center for Genomic Integrity, Ulsan, Korea.
Suhyeon YoonNational Institute of Allergy and Infectious Diseases, National Institutes of Health, Integrated Data Sciences Section, Research Technologies Branch, Bethesda, MD, United States of America.
Kyoo-Young LeeInstitute for Basic Science, Center for Genomic Integrity, Ulsan, Korea.
Yoonsung LeeClinical Research Institute, Kyung Hee University Hospital at Gangdong, College of Medicine, Kyung Hee University, Seoul, Korea.
Sukhyun KangInstitute for Basic Science, Center for Genomic Integrity, Ulsan, Korea.
Kyungjae MyungInstitute for Basic Science, Center for Genomic Integrity, Ulsan, Korea.
Chang-Kyu OhDepartment of Biochemistry, Pusan National University, School of Medicine, Yangsan, Korea.ORCID 0009-0009-8609-4338

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Proliferating cell nuclear antigen (PCNA) is a maestro of DNA replication. PCNA forms a homotrimer and interacts with various proteins, such as DNA polymerases, DNA ligase I (LIG1), and flap endonuclease 1 (FEN1) for faithful DNA replication. Here, we identify the crucial role of Ser46-Leu47 residues of PCNA in maintaining genomic integrity using in vitro, and cell-based assays and structural prediction. The predicted PCNAΔSL47 structure shows the potential distortion of the central loop and reduced hydrophobicity. PCNAΔSL47 shows a defective interaction with PCNAWT leading to defects in homo-trimerization in vitro. PCNAΔSL47 is defective in the FEN1 and LIG1 interaction. PCNA ubiquitination and DNA-RNA hybrid processing are defective in PCNAΔSL47-expressing cells. Accordingly, PCNAΔSL47-expressing cells exhibit an increased number of single-stranded DNA gaps and higher levels of γH2AX, and sensitivity to DNA-damaging agents, highlighting the importance of PCNA Ser46-Leu47 residues in maintaining genomic integrity.

Indexed as

DNA ReplicationFlap EndonucleasesDNADNA-Directed DNA PolymeraseGenomicsProliferating Cell Nuclear AntigenDNADNA-Directed DNA PolymeraseFlap EndonucleasesProliferating Cell Nuclear Antigen

Identifiers

PMID37205694
PMCPMC10198555

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.