Evidence map›Paper›PMID 37205560›Full record

ArticlebioRxiv : the preprint server for biology2023

Phosphorylation of 53BP1 by ATM enforce neurodevelopmental programs in cortical organoids.

Bitna Lim, Mohamed Nadhir Djekidel, Yurika Matsui, Seunghyun Jung, Zuo-Fei Yuan, Xusheng Wang, Xiaoyang Yang, Abbas Shirinifard Pilehroud, Haitao Pan, Fang Wang and 7 more

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 1 institution in 1 country.

Bitna Lim
Mohamed Nadhir Djekidel
Seunghyun Jung
Zuo-Fei Yuan
Xusheng Wang
Xiaoyang Yang
Abbas Shirinifard Pilehroud
Haitao Pan
Fang Wang
Shondra Pruett-Miller
Kanisha Kavdia
Vishwajeeth Pagala
Yiping Fan
Beisi Xu
Jamy C Peng
St. Jude Children's Research Hospital · US

Funding

Gene regulation for stem cell differentiationR01GM134358 · NIGMS · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI PENG, JAMY C. · 2019 to 2023
$2.1M
NIGMS NIH HHS R01 GM134358
6 · The paper itself

Abstract

53BP1 is a well-established DNA damage repair factor recently shown to regulate gene expression and critically influence tumor suppression and neural development. For gene regulation, how 53BP1 is regulated remains unclear. Here, we showed that 53BP1-serine 25 phosphorylation by ATM is required for neural progenitor cell proliferation and neuronal differentiation in cortical organoids. 53BP1-serine 25 phosphorylation dynamics controls 53BP1 target genes for neuronal differentiation and function, cellular response to stress, and apoptosis. Beyond 53BP1, ATM is required for phosphorylation of factors in neuronal differentiation, cytoskeleton, p53 regulation, and ATM, BNDF, and WNT signaling pathways for cortical organoid differentiation. Overall, our data suggest that 53BP1 and ATM control key genetic programs required for human cortical development.

Identifiers

PMID37205560
PMCPMC10187281
OpenAlexW4372319079

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.