Evidence map›Paper›PMID 37200393›Full record

ArticlePLoS genetics2023

Functional screening of lysosomal storage disorder genes identifies modifiers of alpha-synuclein neurotoxicity.

Meigen Yu, Hui Ye, Ruth B De-Paula, Carl Grant Mangleburg, Timothy Wu, Tom V Lee, Yarong Li, Duc Duong, Bridget Phillips, Carlos Cruchaga and 5 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Enteric glia, neuropeptides, and Parkinson's: impacts of calcitonin gene-related peptide on gut alpha synuclein.American journal of physiology. Gastrointestinal and liver physiology · 2026
    Article
  5. Article
  6. A Common PD-RiskbioRxiv : the preprint server for biology · 2025
    Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Consensus Guidance for Genetic Counseling in GBA1 Variants: A Focus on Parkinson's Disease.Movement disorders : official journal of the Movement Disorder Society · 2024
    Review
  12. Article
  13. Article
  14. Review
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 1 country.

Meigen YuDepartment of Neuroscience, Baylor College of Medicine, Houston, Texas, United States of America.
Hui YeDepartment of Neurology, Baylor College of Medicine, Houston, Texas, United States of America.
Ruth B De-PaulaQuantitative and Computational Biology Program, Baylor College of Medicine, Houston, Texas, United States of America.ORCID 0000-0003-1022-2056
Carl Grant MangleburgDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.
Timothy WuDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.ORCID 0000-0001-5296-2023
Tom V LeeDepartment of Neurology, Baylor College of Medicine, Houston, Texas, United States of America.
Yarong LiDepartment of Neurology, Baylor College of Medicine, Houston, Texas, United States of America.
Duc DuongDepartments of Biochemistry and Neurology, Emory University School of Medicine, Atlanta, Georgia, United States of America.
Bridget PhillipsDepartment of Psychiatry, Washington University, St. Louis, Missouri, United States of America.ORCID 0000-0002-5261-689X
Carlos CruchagaDepartment of Psychiatry, Washington University, St. Louis, Missouri, United States of America.
Genevera I AllenDepartments of Electrical and Computer Engineering, Computer Science, and Statistics, Rice University, Houston, Texas, United States of America.
Nicholas T SeyfriedDepartments of Biochemistry and Neurology, Emory University School of Medicine, Atlanta, Georgia, United States of America.
Ismael Al-RamahiDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.
Juan BotasQuantitative and Computational Biology Program, Baylor College of Medicine, Houston, Texas, United States of America.
Joshua M ShulmanDepartment of Neuroscience, Baylor College of Medicine, Houston, Texas, United States of America.ORCID 0000-0002-1835-1971
Baylor College of Medicine · USEmory University · USWashington University in St. Louis · USNeurological Research Institute · US

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI Michael M Ittmann · 2007 to 2026
$73.9M
Supplement to AMP-AD Brain Proteomic Network Enhancement, Validation and Translation into CSF BiomarkersU01AG061357 · NIA · EMORY UNIVERSITY · PI LEVEY, ALLAN I, SEYFRIED, NICHOLAS THOMAS · 2018 to 2022
$9.1M
Functional Dissection of Alzheimer's Disease Networks in Drosophila: from Association to Causal Modulators of Age-Dependent NeurodegerationR01AG057339 · NIA · BAYLOR COLLEGE OF MEDICINE · PI BOTAS, JUAN, LIU, ZHANDONG · 2017 to 2021
$3.8M
Metabolo-Genetic Dissection of GBA and Lysosomal Genes in Parkinson's Disease and Lewy Body DementiaR21AG068961 · NIA · BAYLOR COLLEGE OF MEDICINE · PI SHULMAN, JOSHUA M · 2020 to 2021
$440k
INTERACTIONS BETWEEN LYSOSOMAL STORAGE DISORDER GENES, SPHINGOLIPID HOMEOSTASIS, AND ALPHA-SYNUCLEIN MECHANISMS IN PARKINSON'S DISEASEF31NS115364 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI YU, MEIGEN · 2020 to 2021
$79k
NCI NIH HHS P30 CA125123NIA NIH HHS R01 AG057339NIA NIH HHS R21 AG068961NIA NIH HHS U01 AG061357NINDS NIH HHS F31 NS115364
6 · The paper itself

Abstract

Heterozygous variants in the glucocerebrosidase (GBA) gene are common and potent risk factors for Parkinson's disease (PD). GBA also causes the autosomal recessive lysosomal storage disorder (LSD), Gaucher disease, and emerging evidence from human genetics implicates many other LSD genes in PD susceptibility. We have systemically tested 86 conserved fly homologs of 37 human LSD genes for requirements in the aging adult Drosophila brain and for potential genetic interactions with neurodegeneration caused by α-synuclein (αSyn), which forms Lewy body pathology in PD. Our screen identifies 15 genetic enhancers of αSyn-induced progressive locomotor dysfunction, including knockdown of fly homologs of GBA and other LSD genes with independent support as PD susceptibility factors from human genetics (SCARB2, SMPD1, CTSD, GNPTAB, SLC17A5). For several genes, results from multiple alleles suggest dose-sensitivity and context-dependent pleiotropy in the presence or absence of αSyn. Homologs of two genes causing cholesterol storage disorders, Npc1a / NPC1 and Lip4 / LIPA, were independently confirmed as loss-of-function enhancers of αSyn-induced retinal degeneration. The enzymes encoded by several modifier genes are upregulated in αSyn transgenic flies, based on unbiased proteomics, revealing a possible, albeit ineffective, compensatory response. Overall, our results reinforce the important role of lysosomal genes in brain health and PD pathogenesis, and implicate several metabolic pathways, including cholesterol homeostasis, in αSyn-mediated neurotoxicity.

Indexed as

alpha-SynucleinParkinson DiseaseAgingAnimalsAnimals, Genetically ModifiedDrosophilaGlucosylceramidaseHumansLysosomesTransferases (Other Substituted Phosphate Groups)alpha-SynucleinGlucosylceramidaseGNPTAB protein, humanTransferases (Other Substituted Phosphate Groups)

Identifiers

PMID37200393
PMCPMC10231792
OpenAlexW4377046928

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.