Evidence map›Paper›PMID 37200365›Full record

ArticlePloS one2023

A novel soybean hairy root system for gene functional validation.

Bruna Medeiros Pereira, Fabrício Arraes, Andressa Cunha Quintana Martins, Nayara Sabrina Freitas Alves, Bruno Paes Melo, Carolina Vianna Morgante, Mario Alfredo Passos Saraiva, Maria Fátima Grossi-de-Sá, Patricia Messenberg Guimaraes, Ana Cristina Miranda Brasileiro

Abstract read
In one paragraph

Article in PloS one, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Functional analysis ofPlant signaling & behavior · 2026
    Article
  2. Functional Characterization ofPlants (Basel, Switzerland) · 2026
    Article
  3. Article
  4. miRNA-Mediated Regulation ofInternational journal of molecular sciences · 2025
    Article
  5. Improved rapid and efficient hairy root transformation usingPlant biotechnology (Tokyo, Japan) · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Bruna Medeiros PereiraEMBRAPA Recursos Genéticos e Biotecnologia, Brasília, DF, Brazil.
Fabrício ArraesEMBRAPA Recursos Genéticos e Biotecnologia, Brasília, DF, Brazil.
Andressa Cunha Quintana MartinsEMBRAPA Recursos Genéticos e Biotecnologia, Brasília, DF, Brazil.
Nayara Sabrina Freitas AlvesEMBRAPA Recursos Genéticos e Biotecnologia, Brasília, DF, Brazil.
Bruno Paes MeloEMBRAPA Recursos Genéticos e Biotecnologia, Brasília, DF, Brazil.
Carolina Vianna MorganteInstituto Nacional de Ciência e Tecnologia-INCT PlantStress Biotech-Embrapa, Brasília, DF, Brazil.
Mario Alfredo Passos SaraivaEMBRAPA Recursos Genéticos e Biotecnologia, Brasília, DF, Brazil.
Maria Fátima Grossi-de-SáEMBRAPA Recursos Genéticos e Biotecnologia, Brasília, DF, Brazil.ORCID 0000-0001-8184-9599
Patricia Messenberg GuimaraesEMBRAPA Recursos Genéticos e Biotecnologia, Brasília, DF, Brazil.
Ana Cristina Miranda BrasileiroEMBRAPA Recursos Genéticos e Biotecnologia, Brasília, DF, Brazil.ORCID 0000-0003-0530-062X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Agrobacterium rhizogenes-mediated transformation has long been explored as a versatile and reliable method for gene function validation in many plant species, including soybean (Glycine max). Likewise, detached-leaf assays have been widely used for rapid and mass screening of soybean genotypes for disease resistance. The present study combines these two methods to establish an efficient and practical system to generate transgenic soybean hairy roots from detached leaves and their subsequent culture under ex vitro conditions. We demonstrated that hairy roots derived from leaves of two (tropical and temperate) soybean cultivars could be successfully infected by economically important species of root-knot nematodes (Meloidogyne incognita and M. javanica). The established detached-leaf method was further explored for functional validation of two candidate genes encoding for cell wall modifying proteins (CWMPs) to promote resistance against M. incognita through distinct biotechnological strategies: the overexpression of a wild Arachis α-expansin transgene (AdEXPA24) and the dsRNA-mediated silencing of an endogenous soybean polygalacturonase gene (GmPG). AdEXPA24 overexpression in hairy roots of RKN-susceptible soybean cultivar significantly reduced nematode infection by approximately 47%, whereas GmPG downregulation caused an average decrease of 37%. This novel system of hairy root induction from detached leaves showed to be an efficient, practical, fast, and low-cost method suitable for high throughput in root analysis of candidate genes in soybean.

Indexed as

Glycine maxNematodaAnimalsGenotypePlant LeavesTransgenes

Identifiers

PMID37200365
PMCPMC10194865

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.