Evidence map›Paper›PMID 37199915›Full record

ArticlemSystems2023

Metatranscriptomic analysis uncovers prevalent viral ORFs compatible with mitochondrial translation.

Adam Begeman, Artem Babaian, Samantha C Lewis

Open access · goldAbstract read
In one paragraph

Article in mSystems, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Unveiling mycoviral diversity inFrontiers in microbiology · 2024
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Adam BegemanDepartment of Molecular and Cell Biology, University of California , Berkeley, California, USA.
Artem BabaianDepartment of Molecular Genetics, University of Toronto , Toronto, Ontario, Canada.
Samantha C LewisDepartment of Molecular and Cell Biology, University of California , Berkeley, California, USA.ORCID 0000-0001-6306-443X
University of California, Berkeley · USUniversity of Toronto · CA

Funding

THE MOLECULAR BASIS OF CELL FUNCTIONT32GM007232 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI BILDER, DAVID, UNAL, ELCIN · 1985 to 2022
$36.4M
Systems analysis of mitochondrial genome maintenance in physiological contextR35GM147218 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI Samantha C Lewis · 2022 to 2026
$2.1M
Molecular mechanisms of mtDNA inheritanceR00GM129456 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI LEWIS, SAMANTHA C · 2020 to 2022
$747k
NIGMS NIH HHS R00 GM129456NIGMS NIH HHS R35 GM147218NIGMS NIH HHS T32 GM007232NIH HHS R00GM129456
6 · The paper itself

Abstract

RNA viruses are ubiquitous components of the global virosphere, yet relatively little is known about their genetic diversity or the cellular mechanisms by which they exploit the biology of their diverse eukaryotic hosts. A hallmark of (+)ssRNA (positive single-stranded RNA) viruses is the ability to remodel host endomembranes for their own replication. However, the subcellular interplay between RNA viruses and host organelles that harbor gene expression systems, such as mitochondria, is complex and poorly understood. Here we report the discovery of 763 new virus sequences belonging to the family

Indexed as

RNA VirusesVirusesCodonOpen Reading FramesRNA-Dependent RNA PolymeraseCodonRNA-Dependent RNA PolymerasemetagenomicsmitochondriamitovirusRNA virustranslationvirus evolution

Identifiers

PMID37199915
PMCPMC10308907
OpenAlexW4377011669

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.