Evidence map›Paper›PMID 37199468›Full record

ArticleRNA biology2023

The continuing discovery on the evidence for RNA editing in SARS-CoV-2.

Xiaoxin Pu, Qinwei Xu, Jinxiang Wang, Baoyi Liu

Abstract read
In one paragraph

Article in RNA biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. RNA biology · 2024
    Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Xiaoxin PuDepartment of Respiratory and Critical Care Medicine, Qilu Hospital (Qingdao), Cheeloo College Medicine, Shandong University, Qingdao, China.ORCID 0000-0003-2995-6586
Qinwei XuDepartment of Respiratory and Critical Care Medicine, Qilu Hospital (Qingdao), Cheeloo College Medicine, Shandong University, Qingdao, China.
Jinxiang WangDepartment of Respiratory and Critical Care Medicine, Qilu Hospital (Qingdao), Cheeloo College Medicine, Shandong University, Qingdao, China.
Baoyi LiuDepartment of Respiratory and Critical Care Medicine, Qilu Hospital, Cheeloo College Medicine, Shandong University, Jinan, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recent studies have presented strong evidence that C-to-U RNA editing is the driving force that fuels severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) evolution. The findings finally ended the long-term debate on the evolutionary driving force behind SARS-CoV-2 evolution. Here, we would first acknowledge the breakthroughs made by the recent works, such as using the global SARS-CoV-2 data to demonstrate the major mutation source of this virus. Meanwhile, we would raise a few concerns on the accuracy of their interpretation on C-to-U RNA editing. By re-analysing the SARS-CoV-2 population data, we found that the editing frequency on C-to-U sites did not perfectly correlate with the binding motif of the editing enzyme APOBEC, suggesting that there might be false-positive sites among the C-to-U mutations or the original data did not fully represent the novel mutation rate. We hope our work could help people understand the molecular basis underlying SARS-CoV-2 mutation and also be useful to guide future studies on SARS-CoV-2 evolution.

Indexed as

COVID-19SARS-CoV-2HumansMutationRNA EditingAPOBEC motifC-to-U RNA editingEvidenceevolutionSARS-CoV-2

Identifiers

PMID37199468
PMCPMC10197976

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.