Evidence map›Paper›PMID 37198784›Full record

ArticlePhysical review. E2023

Herding of proteins by the ends of shrinking polymers.

Amer Al-Hiyasat, Yazgan Tuna, Yin-Wei Kuo, Jonathon Howard

Abstract read
In one paragraph

Article in Physical review. E, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Amer Al-HiyasatDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut 06511, USA.
Yazgan TunaDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut 06511, USA.
Yin-Wei KuoDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut 06511, USA.
Jonathon HowardDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut 06511, USA.

Funding

Microtubule Severing and Regrowth by SpastinR01GM139337 · NIGMS · YALE UNIVERSITY · PI HOWARD, JONATHON · 2020 to 2023
$1.3M
NIGMS NIH HHS R01 GM139337
6 · The paper itself

Abstract

The control of biopolymer length is mediated by proteins that localize to polymer ends and regulate polymerization dynamics. Several mechanisms have been proposed to achieve end localization. Here, we propose a novel mechanism by which a protein that binds to a shrinking polymer and slows its shrinkage will be spontaneously enriched at the shrinking end through a "herding" effect. We formalize this process using both lattice-gas and continuum descriptions, and we present experimental evidence that the microtubule regulator spastin employs this mechanism. Our findings extend to more general problems involving diffusion within shrinking domains.

Indexed as

PolymersProteinsMicrotubulesPolymersProteins

Identifiers

PMID37198784
PMCPMC11550390

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.