Evidence map›Paper›PMID 37198482›Full record

ArticleNature2023

ERα-associated translocations underlie oncogene amplifications in breast cancer.

Jake June-Koo Lee, Youngsook Lucy Jung, Taek-Chin Cheong, Jose Espejo Valle-Inclan, Chong Chu, Doga C Gulhan, Viktor Ljungström, Hu Jin, Vinayak V Viswanadham, Emma V Watson and 5 more

Open access · hybridAbstract read
In one paragraph

Article in Nature, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed
40.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed, 115 citations in OpenAlex.

  1. Phase 2 Study of Amivantamab Plus Lazertinib in Previously Treated Patients With EGFR-Mutant Lung Cancers With Brain and Leptomeningeal Metastases.Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer · 2026
    Trial
  2. Review
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  4. Article
  5. Article
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  7. Article
  8. Article
  9. Review
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  11. Evolution of oncogene amplification across 86,000 cancer cell genomes.bioRxiv : the preprint server for biology · 2026
    Article
  12. Topographical archetypes of somatic mutagenesis in cancer.bioRxiv : the preprint server for biology · 2026
    Article
  13. Review
  14. Article
  15. ESR1 fusions in breast cancer: functions, mechanisms and therapeutic opportunities.Translational breast cancer research : a journal focusing on translational research in breast cancer · 2026
    Review
  16. Review
  17. Clinicopathological and genomic features of extrachromosomal DNA in gastric cancer.Gastric cancer : official journal of the International Gastric Cancer Association and the Japanese Gastric Cancer Association · 2026
    Article
  18. Article
  19. Article
  20. Article

13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 3 countries.

Jake June-Koo LeeDepartment of Biomedical Informatics, Harvard Medical School, Boston, MA, USA. leej39@mskcc.org.ORCID 0000-0003-1348-4094
Youngsook Lucy Jung *Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.
Taek-Chin Cheong *Department of Pathology, Boston Children's Hospital and Harvard Medical School, Boston, MA, USA.ORCID 0000-0002-0939-9412
Jose Espejo Valle-InclanEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Hinxton, UK.ORCID 0000-0002-4857-5984
Chong ChuDepartment of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.ORCID 0000-0002-0796-2339
Doga C GulhanDepartment of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.
Viktor LjungströmDepartment of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.
Hu JinDepartment of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.
Vinayak V ViswanadhamDepartment of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.ORCID 0000-0002-0236-6490
Emma V WatsonDepartment of Genetics, Harvard Medical School, Boston, MA, USA.
Isidro Cortés-CirianoEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Hinxton, UK.ORCID 0000-0002-2036-494X
Stephen J ElledgeLudwig Center at Harvard, Harvard Medical School, Boston, MA, USA.ORCID 0000-0001-7923-6283
Roberto ChiarleDepartment of Pathology, Boston Children's Hospital and Harvard Medical School, Boston, MA, USA.ORCID 0000-0003-1564-8531
David PellmanLudwig Center at Harvard, Harvard Medical School, Boston, MA, USA.ORCID 0000-0001-5306-8031
Peter J ParkDepartment of Biomedical Informatics, Harvard Medical School, Boston, MA, USA. peter_park@hms.harvard.edu.ORCID 0000-0001-9378-960X
Harvard University · USBoston Children's Hospital · USBrigham and Women's Hospital · USEuropean Bioinformatics Institute · GBHoward Hughes Medical Institute · USMemorial Sloan Kettering Cancer Center · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
RESEARCH TRAINING-MEDICAL INFORMATICS 90T15LM007092 · NLM · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI Nils Gehlenborg · 1992 to 2026
$32.8M
Training Program in Bioinformatics and Integrative GenomicsT32HG002295 · NHGRI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI Peter J Park · 2001 to 2026
$15.8M
Polyploidy, Aneuploidy and Genome StabilityR01CA213404 · NCI · DANA-FARBER CANCER INST · PI PELLMAN, DAVID S · 2017 to 2024
$3.5M
APOBEC proteins as drivers of chromosomal translocations in solid cancersR01CA222598 · NCI · BOSTON CHILDREN'S HOSPITAL · PI CHIARLE, ROBERTO · 2018 to 2022
$2.0M
Characterizing mechanisms and consequences of intergenic transcription in human cancersF31CA264958 · NCI · HARVARD MEDICAL SCHOOL · PI VISWANADHAM, VINAYAK VENKATASESHA · 2021 to 2022
$60k
NCI NIH HHS F31 CA264958NCI NIH HHS P30 CA008748NCI NIH HHS R01 CA213404NCI NIH HHS R01 CA222598NHGRI NIH HHS T32 HG002295NLM NIH HHS T15 LM007092
6 · The paper itself

Abstract

Focal copy-number amplification is an oncogenic event. Although recent studies have revealed the complex structure

Indexed as

Breast NeoplasmsEstrogen Receptor alphaGene AmplificationOncogenesTranslocation, GeneticCyclin D1DNA Breaks, Double-StrandedErb-b2 Receptor Tyrosine KinasesEstrogensFemaleGenome, HumanHumansOrgan SpecificityCCND1 protein, humanCyclin D1ERBB2 protein, humanErb-b2 Receptor Tyrosine KinasesESR1 protein, humanEstrogen Receptor alphaEstrogens

Identifiers

PMID37198482
PMCPMC10307628
OpenAlexW4376959427

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.