Evidence map›Paper›PMID 37198396›Full record

ArticleCommunications biology2023

Forward genetic screening using fundus spot scale identifies an essential role for Lipe in murine retinal homeostasis.

Seher Yuksel, Bogale Aredo, Yeshumenesh Zegeye, Cynthia X Zhao, Miao Tang, Xiaohong Li, John D Hulleman, Laurent Gautron, Sara Ludwig, Eva M Y Moresco and 3 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. A mutation inMolecular vision · 2026
    Article
  3. Minocycline treatment reduces the activation of mononuclear phagocytes and improves retinal function in a mouse model of Leber congenital amaurosis.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2025
    Article
  4. Article
  5. Review
  6. Article
  7. Molecular mechanism of bitter taste receptor agonist-mediated relaxation of airway smooth muscle.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2024
    Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Seher Yuksel *Department of Ophthalmology, UT Southwestern Medical Center, Dallas, TX, USA.ORCID 0000-0003-2373-7809
Bogale Aredo *Department of Ophthalmology, UT Southwestern Medical Center, Dallas, TX, USA.
Yeshumenesh ZegeyeDepartment of Ophthalmology, UT Southwestern Medical Center, Dallas, TX, USA.ORCID 0000-0002-3327-4708
Cynthia X ZhaoDepartment of Ophthalmology, UT Southwestern Medical Center, Dallas, TX, USA.
Miao TangCenter for the Genetics of Host Defense, University of Texas Southwestern Medical Center, Dallas, TX, USA.
Xiaohong LiCenter for the Genetics of Host Defense, University of Texas Southwestern Medical Center, Dallas, TX, USA.
John D HullemanDepartment of Ophthalmology, UT Southwestern Medical Center, Dallas, TX, USA.ORCID 0000-0001-8149-656X
Laurent GautronCenter for Hypothalamic Research and Department of Internal Medicine, University of Texas Southwestern Medical Center, Dallas, TX, USA.ORCID 0000-0003-3609-7441
Sara LudwigCenter for the Genetics of Host Defense, University of Texas Southwestern Medical Center, Dallas, TX, USA.
Eva M Y MorescoCenter for the Genetics of Host Defense, University of Texas Southwestern Medical Center, Dallas, TX, USA.ORCID 0000-0002-2049-7291
Igor A ButovichDepartment of Ophthalmology, UT Southwestern Medical Center, Dallas, TX, USA. Igor.Butovich@UTSouthwestern.edu.ORCID 0000-0003-2704-986X
Bruce A BeutlerCenter for the Genetics of Host Defense, University of Texas Southwestern Medical Center, Dallas, TX, USA. Bruce.Beutler@UTSouthwestern.edu.ORCID 0000-0002-3639-246X
Rafael L Ufret-VincentyDepartment of Ophthalmology, UT Southwestern Medical Center, Dallas, TX, USA. Rafael.Ufret-Vincenty@UTSouthwestern.edu.ORCID 0000-0001-8022-5119
Southwestern Medical Center · USThe University of Texas Southwestern Medical Center · US

Funding

Systems Biology CoreU19AI100627 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI ULEVITCH, RICHARD J · 2012 to 2021
$49.1M
Automated Forward Genetic Analysis of Adaptive ImmunityR01AI125581 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI BRUCE A BEUTLER · 2016 to 2026
$19.5M
UT Southwestern NORCP30DK127984 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI Jeffrey M Zigman · 2022 to 2026
$7.4M
Stem Cell, Organoid and Cell Phenotyping ModuleP30EY030413 · NEI · UT SOUTHWESTERN MEDICAL CENTER · PI W MATTHEW PETROLL · 2019 to 2026
$5.9M
Meibogenesis in Health, Disease, and Aging - Administrative SupplementR01EY027349 · NEI · UT SOUTHWESTERN MEDICAL CENTER · PI BUTOVICH, IGOR A · 2017 to 2025
$2.9M
Exploring Mechanisms in Retinal Development/Homeostasis, Retinal Immune Surveillance and Diabetic Retinopathy Using Forward GeneticsR01EY033181 · NEI · UT SOUTHWESTERN MEDICAL CENTER · PI UFRET-VINCENTY, RAFAEL · 2021 to 2025
$2.2M
NEI NIH HHS R01 EY027349NEI NIH HHS R01 EY033181NIAID NIH HHS R01 AI125581NIAID NIH HHS U19 AI100627NIDDK NIH HHS P30 DK127984
6 · The paper itself

Abstract

Microglia play a role in the pathogenesis of many retinal diseases. Fundus spots in mice often correlate with the accumulation of activated subretinal microglia. Here we use a semiquantitative fundus spot scoring scale in combination with an unbiased, state-of-the-science forward genetics pipeline to identify causative associations between chemically induced mutations and fundus spot phenotypes. Among several associations, we focus on a missense mutation in Lipe linked to an increase in yellow fundus spots in C57BL/6J mice. Lipe

Indexed as

Retinal DegenerationAnimalsDisease Models, AnimalGenetic TestingLipidsMiceMice, Inbred C57BLLipids

Identifiers

PMID37198396
PMCPMC10192353
OpenAlexW4376959232

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.