Evidence map›Paper›PMID 37198361›Full record

ArticleAnalytical and bioanalytical chemistry2023

Integrated microscale immiscible phase extraction and isothermal amplification for colorimetric detection of Neisseria gonorrhoeae.

Pablo Rodriguez-Mateos, Bongkot Ngamsom, Daglus Ameyo, Patrick Wakaba, Clement Shiluli, Alexander Iles, Jesse Gitaka, Nicole Pamme

Abstract read
In one paragraph

Article in Analytical and bioanalytical chemistry, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Pablo Rodriguez-MateosDepartment of Materials and Environmental Chemistry, Stockholm University, Stockholm, Sweden.
Bongkot NgamsomCentre for Biomedicine, Hull York Medical School, University of Hull, Hull, UK.
Daglus AmeyoDirectorate of Research and Innovation, Mount Kenya University, Thika, Kenya.
Patrick WakabaDirectorate of Research and Innovation, Mount Kenya University, Thika, Kenya.
Clement ShiluliDirectorate of Research and Innovation, Mount Kenya University, Thika, Kenya.
Alexander IlesDepartment of Materials and Environmental Chemistry, Stockholm University, Stockholm, Sweden.
Jesse Gitaka *Directorate of Research and Innovation, Mount Kenya University, Thika, Kenya. jgitaka@mku.ac.ke.
Nicole Pamme *Department of Materials and Environmental Chemistry, Stockholm University, Stockholm, Sweden. nicole.pamme@mmk.su.se.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gonorrhea is the second most common sexually transmitted infection (STI) with around 87 million cases worldwide estimated in 2016 by the World Health Organization. With over half of the cases being asymptomatic, potential life-threatening complications and increasing numbers of drug-resistant strains, routine monitoring of prevalence and incidence of infections are key preventive measures. Whilst gold standard qPCR tests have excellent accuracy, they are neither affordable nor accessible in low-resource settings. In this study, we developed a lab-on-a-chip platform based on microscale immiscible filtration to extract, concentrate and purify Neisseria gonorrhoeae DNA with an integrated detection assay based on colorimetric isothermal amplification. The platform was capable of detecting as low as 500 copies/mL from spiked synthetic urine and showed no cross-reactivity when challenged with DNAs from other common STIs. The credit card-size device allows DNA extraction and purification without power or centrifuges, and the detection reaction only needs a low-tech block heater, providing a straightforward and visual positive/negative result within 1 h. These advantages offer great potential for accurate, affordable and accessible monitoring of gonorrhea infection in resource-poor settings.

Indexed as

Chlamydia InfectionsGonorrheaSexually Transmitted DiseasesChlamydia trachomatisColorimetryHumansNeisseria gonorrhoeaeDNA extractionImmiscible filtrationLAMPMagnetic particleNAATNeisseria gonorrhoeae

Identifiers

PMID37198361
PMCPMC10191819

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.