Evidence map›Paper›PMID 37196769›Full record

ArticleThe Journal of biological chemistry2023

Opening of capsaicin receptor TRPV1 is stabilized equally by its four subunits.

Shisheng Li, Phuong T Nguyen, Simon Vu, Vladimir Yarov-Yarovoy, Jie Zheng

Open access · goldAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Shisheng LiDepartment of Physiology and Membrane Biology, School of Medicine, University of California at Davis, Davis, California, USA.
Phuong T NguyenDepartment of Physiology and Membrane Biology, School of Medicine, University of California at Davis, Davis, California, USA.
Simon VuDepartment of Physiology and Membrane Biology, School of Medicine, University of California at Davis, Davis, California, USA.
Vladimir Yarov-YarovoyDepartment of Physiology and Membrane Biology, School of Medicine, University of California at Davis, Davis, California, USA.
Jie ZhengDepartment of Physiology and Membrane Biology, School of Medicine, University of California at Davis, Davis, California, USA. Electronic address: jzheng@ucdavis.edu.
University of California, Davis · US

Funding

Structural mechanism of polymodal TRP channel activationR01NS103954 · NINDS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI YAROV-YAROVOY, VLADIMIR M, ZHENG, JIE · 2018 to 2022
$1.7M
NINDS NIH HHS R01 NS103954
6 · The paper itself

Abstract

Capsaicin receptor TRPV1 is a nociceptor for vanilloid molecules, such as capsaicin and resiniferatoxin (RTX). Even though cryo-EM structures of TRPV1 in complex with these molecules are available, how their binding energetically favors the open conformation is not known. Here, we report an approach to control the number of bound RTX molecules (0-4) in functional rat TRPV1. The approach allowed direct measurements of each of the intermediate open states under equilibrium conditions at both macroscopic and single-molecule levels. We found that RTX binding to each of the four subunits contributes virtually the same activation energy, which we estimated to be 1.70 to 1.86 kcal/mol and found to arise predominately from destabilizing the closed conformation. We further showed that sequential bindings of RTX increase open probability without altering single-channel conductance, confirming that there is likely a single open-pore conformation for TRPV1 activated by RTX.

Indexed as

DiterpenesTRPV Cation ChannelsAnimalsCapsaicinRatsCapsaicinDiterpenesTrpv1 protein, ratTRPV Cation Channelsallosteryconcatemerintermediate statesresiniferatoxinTRPV1

Identifiers

PMID37196769
PMCPMC10318505
OpenAlexW4377011292

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.