Evidence map›Paper›PMID 37195197›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2023

Proteogenomic and V(D)J Analysis of Human Decidual T Cells Highlights Unique Transcriptional Programming and Clonal Distribution.

Deborah A Chasman, Rene Welch Schwartz, Jessica Vazquez, Melina Chavarria, Eryne T Jenkins, Gladys E Lopez, Chanel T Tyler, Aleksandar K Stanic, Irene M Ong

Open access · greenAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 4 citations in OpenAlex.

  1. Decidual CD4 Effector Memory and Resident Memory T Cells Respond to Cord Blood Allo-Antigens.American journal of reproductive immunology (New York, N.Y. : 1989) · 2026
    Article
  2. Review
  3. Article
  4. Review
  5. CD4Frontiers in immunology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Deborah A ChasmanDepartment of Obstetrics and Gynecology, University of Wisconsin-Madison, Madison, WI.ORCID 0000-0002-7324-0131
Rene Welch SchwartzDepartment of Obstetrics and Gynecology, University of Wisconsin-Madison, Madison, WI.ORCID 0000-0001-9861-530X
Jessica VazquezDepartment of Obstetrics and Gynecology, University of Wisconsin-Madison, Madison, WI.
Melina ChavarriaDepartment of Obstetrics and Gynecology, University of Wisconsin-Madison, Madison, WI.
Eryne T JenkinsDepartment of Obstetrics and Gynecology, University of Wisconsin-Madison, Madison, WI.ORCID 0000-0002-2972-2555
Gladys E LopezDepartment of Obstetrics and Gynecology, University of Wisconsin-Madison, Madison, WI.
Chanel T TylerDepartment of Obstetrics and Gynecology, University of Wisconsin-Madison, Madison, WI.
Aleksandar K StanicDepartment of Obstetrics and Gynecology, University of Wisconsin-Madison, Madison, WI.ORCID 0000-0003-1946-6436
Irene M OngDepartment of Obstetrics and Gynecology, University of Wisconsin-Madison, Madison, WI.ORCID 0000-0002-9353-6941
University of Wisconsin–Madison · US

Funding

University of Wisconsin Institute for Clinical and Translational ResearchUL1TR002373 · NCATS · UNIVERSITY OF WISCONSIN-MADISON · PI ELIZABETH S BURNSIDE, Allan R. Brasier · 2017 to 2026
$75.9M
REPRODUCTIVE SCIENTIST TRAINING PROGRAMK12HD000849 · NICHD · WASHINGTON UNIVERSITY · PI Danny J Schust · 1988 to 2026
$33.2M
Wisconsin Infant Study Cohort (WISC)U19AI104317 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI James E. Gern · 2013 to 2026
$22.5M
Project 3: Modulation of the head and neck tumor immune microenvironment by targeting the TAM family of receptorsP50CA278595 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI David J Beebe · 2022 to 2026
$12.5M
Project 4: Role of Receptor Tyrosine Kinase AXL in HNSCC Therapy ResistanceP50DE026787 · NIDCR · UNIVERSITY OF WISCONSIN-MADISON · PI HARARI, PAUL M · 2016 to 2020
$10.8M
Institutional Career Development CoreKL2TR002374 · NCATS · UNIVERSITY OF WISCONSIN-MADISON · PI Bo Liu, Marin Leigh Schweizer · 2017 to 2026
$9.7M
Training & Education to Advance Minorities in Science (TEAM-Science)R25GM083252 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI BIRD, IAN M. · 2008 to 2021
$8.5M
Endocrinology-Reproductive Physiology Training GrantT32HD041921 · NICHD · UNIVERSITY OF WISCONSIN-MADISON · PI BIRD, IAN M. · 2004 to 2022
$3.0M
Integrated Program in Endocrinology Translational Postdoctoral Training ProgramT32HD101384 · NICHD · UNIVERSITY OF WISCONSIN-MADISON · PI IAN M. BIRD, Jon E Levine · 2021 to 2026
$2.0M
NCATS NIH HHS KL2 TR002374NCATS NIH HHS UL1 TR002373NCI NIH HHS P50 CA278595NIAID NIH HHS U19 AI104317NICHD NIH HHS K12 HD000849NICHD NIH HHS T32 HD041921NICHD NIH HHS T32 HD101384NIDCR NIH HHS P50 DE026787NIGMS NIH HHS R25 GM083252
6 · The paper itself

Abstract

Immunological tolerance toward the semiallogeneic fetus is one of many maternal adaptations required for a successful pregnancy. T cells are major players of the adaptive immune system and balance tolerance and protection at the maternal-fetal interface; however, their repertoire and subset programming are still poorly understood. Using emerging single-cell RNA sequencing technologies, we simultaneously obtained transcript, limited protein, and receptor repertoire at the single-cell level, from decidual and matched maternal peripheral human T cells. The decidua maintains a tissue-specific distribution of T cell subsets compared with the periphery. We find that decidual T cells maintain a unique transcriptome programming, characterized by restraint of inflammatory pathways by overexpression of negative regulators (DUSP, TNFAIP3, ZFP36) and expression of PD-1, CTLA-4, TIGIT, and LAG3 in some CD8 clusters. Finally, analyzing TCR clonotypes demonstrated decreased diversity in specific decidual T cell populations. Overall, our data demonstrate the power of multiomics analysis in revealing regulation of fetal-maternal immune coexistence.

Indexed as

DeciduaProteogenomicsFemaleFetusHumansPregnancyT-Lymphocyte SubsetsTranscriptome

Identifiers

PMID37195197
PMCPMC10330249
OpenAlexW4376872689

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.