Evidence map›Paper›PMID 37194699›Full record

ArticleNucleic acids research2023

ChemMaps.com v2.0: exploring the environmental chemical universe.

Alexandre Borrel, Mike Conway, Sue Z Nolte, Aswani Unnikrishnan, Charles P Schmitt, Nicole C Kleinstreuer

Abstract read
In one paragraph

Article in Nucleic acids research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Selector: A General Python Library for Diverse Subset Selection.Journal of chemical information and modeling · 2026
    Article
  2. Selector: A General Python Library for Diverse Subset Selection.bioRxiv : the preprint server for biology · 2025
    Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Alexandre BorrelInotiv, RTP, NC, 27560, USA.ORCID 0000-0001-6499-4540
Mike ConwayNIH/NIEHS/ODS, RTP, NC 27709, USA.
Sue Z NolteNIH/NIEHS/ODS, RTP, NC 27709, USA.
Aswani UnnikrishnanInotiv, RTP, NC, 27560, USA.
Charles P SchmittNIH/NIEHS/ODS, RTP, NC 27709, USA.
Nicole C KleinstreuerNIH/NIEHS/DTT/NICEATM, RTP, NC 27709, USA.ORCID 0000-0002-7914-3682

Funding

Scientific Cyberinfrastructure Research ProgramZIAES103385 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI WALKER, VICKIE · 2022 to 2025
$17.4M
Research Operations Supporting the National Toxicology Program Interagency Center for the Evaluation of Alternative Toxicological MethodsZICES103386 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI HOGBERG-DURDOCK, HELENA · 2022 to 2025
$3.3M
Development of Data Science MethodsZIAES103364 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI SCHMITT, CHARLES · 2021 to 2025
$1.6M
NIEHS NIH HHS HHSN273201500010CNIH HHS HHSN273201500010C
6 · The paper itself

Abstract

Access to computationally based visualization tools to navigate chemical space has become more important due to the increasing size and diversity of publicly accessible databases, associated compendiums of high-throughput screening (HTS) results, and other descriptor and effects data. However, application of these techniques requires advanced programming skills that are beyond the capabilities of many stakeholders. Here we report the development of the second version of the ChemMaps.com webserver (https://sandbox.ntp.niehs.nih.gov/chemmaps/) focused on environmental chemical space. The chemical space of ChemMaps.com v2.0, released in 2022, now includes approximately one million environmental chemicals from the EPA Distributed Structure-Searchable Toxicity (DSSTox) inventory. ChemMaps.com v2.0 incorporates mapping of HTS assay data from the U.S. federal Tox21 research collaboration program, which includes results from around 2000 assays tested on up to 10 000 chemicals. As a case example, we showcased chemical space navigation for Perfluorooctanoic Acid (PFOA), part of the Per- and polyfluoroalkyl substances (PFAS) chemical family, which are of significant concern for their potential effects on human health and the environment.

Indexed as

Databases, ChemicalHigh-Throughput Screening AssaysSoftwareEnvironment

Identifiers

PMID37194699
PMCPMC10320154

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.