Evidence map›Paper›PMID 37193875›Full record

ArticleAnalytical and bioanalytical chemistry2023

Label-free analysis of biofilm phenotypes by infrared micro- and correlation spectroscopy.

Yadi Wang, Huiping Liu, Feng Geng, Pan Yang, Junhong Lü, Xueling Li

Abstract read
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In one paragraph

Article in Analytical and bioanalytical chemistry, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yadi WangCollege of Pharmacy, Binzhou Medical University, Yantai, 264003, China.
Huiping LiuCollege of Pharmacy, Binzhou Medical University, Yantai, 264003, China.
Feng GengCollege of Pharmacy, Binzhou Medical University, Yantai, 264003, China.
Pan YangCollege of Pharmacy, Binzhou Medical University, Yantai, 264003, China.
Junhong LüCollege of Pharmacy, Binzhou Medical University, Yantai, 264003, China. lvjunhong@jnl.ac.cn.ORCID http://orcid.org/0000-0003-2873-3137
Xueling LiShanghai University of Medicine & Health Sciences, Shanghai, 201318, China. lixl@sumhs.edu.cn.

Funding

Research Project of Jinan Microecological Biomedicine Shandong Laboratory JNL-2022021BYantai Region and College Integration Development Project 2021XDRHXMPT28
6 · The paper itself

Abstract

The methodology development for deeply describing the complex biofilm phenotypes is an urgent demand for understanding their basic biology and the central clinic relevance. Here, we developed an infrared microspectroscopy-based method for the quantitative evaluation and description of biofilm phenotypic characteristics by calculating the spectral similarity of the infrared data. Using this approach, we revealed the phenotypic variation during the biofilm formation process and biofilm heterogeneity between two E. coli strains. Two-dimensional correlation spectroscopy was further combined to deeply investigate the biochemical component evolution sequences during E. coli biofilm formation and revealed the first-order of the polysaccharide molecules change, expanding new opportunities for infrared microspectroscopy in revealing molecule evolution in the biofilm formation. This novel development offers a label-free optical toolkit for the bioanalytical analysis of biofilm phenotypes but also paves the way for screening the drugs to modulate the structure and ecology of biofilm microbiome.

Indexed as

BiofilmsEscherichia coliPhenotypePolysaccharidesSpectroscopy, Fourier Transform InfraredPolysaccharidesBiofilmFourier transform infrared microspectroscopyHeterogeneityPhenotypeTwo-dimensional correlation spectroscopy

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.