Evidence map›Paper›PMID 37192160›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

PHGDH preserves one-carbon cycle to confer metabolic plasticity in chemoresistant gastric cancer during nutrient stress.

Bo Kyung Yoon, Hyeonhui Kim, Tae Gyu Oh, Se Kyu Oh, Sugyeong Jo, Minki Kim, Kyu-Hye Chun, Nahee Hwang, Suji Lee, Suyon Jin and 8 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
9.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 39 citations in OpenAlex.

  1. Review
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  3. The metabolic profiles of cancer stem cells.Stem cell research & therapy · 2026
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  20. Overcoming Cancer Persister Cells by Stabilizing the ATF4 Promoter G-quadruplex.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 2 institutions in 2 countries.

Bo Kyung YoonGraduate school of Medical Science, Brain Korea 21 Project, Yonsei University College of Medicine, Seoul 03722, Korea.
Hyeonhui KimGraduate school of Medical Science, Brain Korea 21 Project, Yonsei University College of Medicine, Seoul 03722, Korea.ORCID 0000-0002-2036-4851
Tae Gyu OhGene Expression Laboratory, Salk Institute for Biological Sciences, La Jolla, CA 92037.ORCID 0000-0002-2756-3546
Se Kyu OhKynogen corporation, Suwon 16229, Korea.
Sugyeong JoGraduate school of Medical Science, Brain Korea 21 Project, Yonsei University College of Medicine, Seoul 03722, Korea.
Minki KimGraduate school of Medical Science, Brain Korea 21 Project, Yonsei University College of Medicine, Seoul 03722, Korea.
Kyu-Hye ChunGraduate school of Medical Science, Brain Korea 21 Project, Yonsei University College of Medicine, Seoul 03722, Korea.
Nahee HwangGraduate school of Medical Science, Brain Korea 21 Project, Yonsei University College of Medicine, Seoul 03722, Korea.
Suji LeeGraduate school of Medical Science, Brain Korea 21 Project, Yonsei University College of Medicine, Seoul 03722, Korea.
Suyon JinGraduate school of Medical Science, Brain Korea 21 Project, Yonsei University College of Medicine, Seoul 03722, Korea.ORCID 0009-0005-3102-7913
Annette R AtkinsGene Expression Laboratory, Salk Institute for Biological Sciences, La Jolla, CA 92037.ORCID 0000-0003-3583-4091
Ruth T YuGene Expression Laboratory, Salk Institute for Biological Sciences, La Jolla, CA 92037.ORCID 0000-0002-9527-9627
Michael DownesGene Expression Laboratory, Salk Institute for Biological Sciences, La Jolla, CA 92037.ORCID 0000-0002-6351-9585
Jae-Woo KimGraduate school of Medical Science, Brain Korea 21 Project, Yonsei University College of Medicine, Seoul 03722, Korea.
Hyunkyung KimDepartment of Biochemistry and Molecular Biology, Korea University College of Medicine, Seoul 02841, Korea.
Ronald M EvansGene Expression Laboratory, Salk Institute for Biological Sciences, La Jolla, CA 92037.ORCID 0000-0002-9986-5965
Jae-Ho CheongGraduate school of Medical Science, Brain Korea 21 Project, Yonsei University College of Medicine, Seoul 03722, Korea.
Sungsoon FangGraduate school of Medical Science, Brain Korea 21 Project, Yonsei University College of Medicine, Seoul 03722, Korea.ORCID 0000-0003-0201-5567
Yonsei University · KRSalk Institute for Biological Studies · US

Funding

Viral Vector Core (VVC)P30CA014195 · NCI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI Reuben Shaw · 1985 to 2026
$82.8M
Organic nanoparticles for dual MRI-guided therapeutic selection and ovarian cancer drug deliveryR01CA220468 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI Jeremiah Allen Johnson · 2017 to 2026
$4.9M
PROVIDE RABBITS, RATS MICE, HAMSTERS GERBILS, GUINEA PIGS27307C0012 · NIEHS · PI BOLEN, WAYNE · 2007 to 2007
$1.0M
NCI NIH HHS P30 CA014195NCI NIH HHS R01 CA220468NIEHS NIH HHS 27307C0012
6 · The paper itself

Abstract

Molecular classification of gastric cancer (GC) identified a subgroup of patients showing chemoresistance and poor prognosis, termed SEM (Stem-like/Epithelial-to-mesenchymal transition/Mesenchymal) type in this study. Here, we show that SEM-type GC exhibits a distinct metabolic profile characterized by high glutaminase (GLS) levels. Unexpectedly, SEM-type GC cells are resistant to glutaminolysis inhibition. We show that under glutamine starvation, SEM-type GC cells up-regulate the 3 phosphoglycerate dehydrogenase (PHGDH)-mediated mitochondrial folate cycle pathway to produce NADPH as a reactive oxygen species scavenger for survival. This metabolic plasticity is associated with globally open chromatin structure in SEM-type GC cells, with ATF4/CEBPB identified as transcriptional drivers of the PHGDH-driven salvage pathway. Single-nucleus transcriptome analysis of patient-derived SEM-type GC organoids revealed intratumoral heterogeneity, with stemness-high subpopulations displaying high GLS expression, a resistance to GLS inhibition, and ATF4/CEBPB activation. Notably, coinhibition of GLS and PHGDH successfully eliminated stemness-high cancer cells. Together, these results provide insight into the metabolic plasticity of aggressive GC cells and suggest a treatment strategy for chemoresistant GC patients.

Indexed as

Phosphoglycerate DehydrogenaseStomach NeoplasmsCell Line, TumorGlutamineHumansNutrientsGlutamineNutrientsPhosphoglycerate Dehydrogenase3 phosphoglycerate dehydrogenasegastric cancerglutaminasemetabolic plasticity

Identifiers

PMID37192160
PMCPMC10214193
OpenAlexW4376872142

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.