Evidence map›Paper›PMID 37192000›Full record

ArticleThe Journal of clinical investigation2023

Human endogenous retrovirus onco-exaptation counters cancer cell senescence through calbindin.

Jan Attig, Judith Pape, Laura Doglio, Anastasiya Kazachenka, Eleonora Ottina, George R Young, Katey Ss Enfield, Iker Valle Aramburu, Kevin W Ng, Nikhil Faulkner and 4 more

Open access · goldAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
12.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 33 citations in OpenAlex.

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  5. TEITbase: a database for transposable element (TE)-initiated transcripts in human cancers.Database : the journal of biological databases and curation · 2026
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 1 institution in 2 countries.

Jan AttigRetroviral Immunology.
Judith PapeRetroviral Immunology.
Laura DoglioRetroviral Immunology.
Anastasiya KazachenkaRetroviral Immunology.
Eleonora OttinaRetroviral Immunology.
George R YoungBioinformatics and Biostatistics.
Katey Ss EnfieldCancer Evolution and Genome Instability, and.
Iker Valle AramburuAntimicrobial Defence, The Francis Crick Institute, London, United Kingdom.
Kevin W NgRetroviral Immunology.
Nikhil FaulknerRetroviral Immunology.
William BollandRetroviral Immunology.
Venizelos PapayannopoulosAntimicrobial Defence, The Francis Crick Institute, London, United Kingdom.
Charles SwantonCancer Evolution and Genome Instability, and.
George KassiotisRetroviral Immunology.
The Francis Crick Institute · GB

Funding

Cancer Research UKMedical Research CouncilWellcome Trust CC2041Wellcome Trust CC2088Wellcome Trust CC2089Wellcome Trust FC001099
6 · The paper itself

Abstract

Increased levels and diversity of human endogenous retrovirus (HERV) transcription characterize most cancer types and are linked with disease outcomes. However, the underlying processes are incompletely understood. Here, we show that elevated transcription of HERVH proviruses predicted survival of lung squamous cell carcinoma (LUSC) and identified an isoform of CALB1, encoding calbindin, ectopically driven by an upstream HERVH provirus under the control of KLF5, as the mediator of this effect. HERVH-CALB1 expression was initiated in preinvasive lesions and associated with their progression. Calbindin loss in LUSC cell lines impaired in vitro and in vivo growth and triggered senescence, consistent with a protumor effect. However, calbindin also directly controlled the senescence-associated secretory phenotype (SASP), marked by secretion of CXCL8 and other neutrophil chemoattractants. In established carcinomas, CALB1-negative cancer cells became the dominant source of CXCL8, correlating with neutrophil infiltration and worse prognosis. Thus, HERVH-CALB1 expression in LUSC may display antagonistic pleiotropy, whereby the benefits of escaping senescence early during cancer initiation and clonal competition were offset by the prevention of SASP and protumor inflammation at later stages.

Indexed as

Carcinoma, Non-Small-Cell LungCarcinoma, Squamous CellEndogenous RetrovirusesLung NeoplasmsCalbindin 1CalbindinsCellular SenescenceHumansProvirusesCALB1 protein, humanCalbindin 1CalbindinsCellular senescenceEpigeneticsGeneticsLung cancerOncology

Identifiers

PMID37192000
PMCPMC10348765
OpenAlexW4376642835

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.