Evidence map›Paper›PMID 37191838›Full record

ArticleJournal of cell communication and signaling2023

Optimized multiplex immunofluorescence for the characterization of tumor immune microenvironment in neoplastic paraffin-preserved tissues.

Fernanda Marconi Roversi, Maura Lima Pereira Bueno, Juliete Aparecida Francisco da Silva, Guilherme Rossi Assis-Mendonça, Sara Teresinha Olalla Saad

Open access · greenAbstract read
In one paragraph

Article in Journal of cell communication and signaling, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Fernanda Marconi RoversiHematology and Transfusion Medicine Center, University of Campinas/Hemocentro-Unicamp, Rua Carlos Chagas, 480 - Cidade Universitária Zeferino Vaz - Barão Geraldo Campinas, São Paulo, CEP: 13083-878, Brazil. feroversi@gmail.com.
Maura Lima Pereira BuenoHematology and Transfusion Medicine Center, University of Campinas/Hemocentro-Unicamp, Rua Carlos Chagas, 480 - Cidade Universitária Zeferino Vaz - Barão Geraldo Campinas, São Paulo, CEP: 13083-878, Brazil.ORCID http://orcid.org/0000-0003-2979-5145
Juliete Aparecida Francisco da SilvaDepartment of Surgery Division of Transplantation, Emory University, Atlanta, GA, USA.
Guilherme Rossi Assis-MendonçaDepartment of Pathology, Faculty of Medical Sciences, University of Campinas-Unicamp, Campinas, São Paulo, Brazil.
Sara Teresinha Olalla SaadHematology and Transfusion Medicine Center, University of Campinas/Hemocentro-Unicamp, Rua Carlos Chagas, 480 - Cidade Universitária Zeferino Vaz - Barão Geraldo Campinas, São Paulo, CEP: 13083-878, Brazil.
Universidade Estadual de Campinas (UNICAMP) · BREmory University · US

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico 303405/2018-0Fundação de Amparo à Pesquisa do Estado de São Paulo 2017/21801-2Fundação de Amparo à Pesquisa do Estado de São Paulo 2019/25247-5Fundação de Amparo à Pesquisa do Estado de São Paulo 2021/05320-0
6 · The paper itself

Abstract

The study of neoplastic cells enabled the discovery of important tumor-related biomarkers which resulted in new forms of early diagnosis, therapeutic options, and prognostic markers. Thus, immunofluorescence (IF), a high throughput imaging technology, represents a valuable method that enables the virtual characterization and localization of diverse cell types and targets, preserving tissue architecture and spatial surroundings. IF staining and analysis of formalin-fixed paraffin-embedded (FFPE) tissues are considered a challenge due to several difficulties, such as tissue autofluorescence, non-specific antibody binding, and image acquisition and quality. This study aimed to develop a multiplex-fluorescence staining technique with high-contrast and high-quality multiple-color images to enrich the investigation of important biomarkers. We present a robust optimized multiple-immunofluorescence procedure that reduced sample autofluorescence, enabled the use of simultaneous antibodies on the same sample, and showed super-resolution imaging through precise antigen localization. We illustrated the utility of this powerful method in FFPE neoplastic appendix, lymph node and bone marrow biopsies, and a 3D-coculture system, in which cells are enabled to grow and interact with their surroundings in all 3D dimensions. Our optimized multiple-immunofluorescence method represents a powerful tool for better understanding the complexity of tumor cells, characterizing cell populations and spatial localization, revealing predictive and prognostic biomarkers, and identifying immunologic phenotypes in a single and limited sample. This valuable IF protocol successfully enables tumor microenvironment profiling that could contribute to the study of cellular crosstalk and the niche, and to the identification of predictive biomarkers for neoplasms.

Indexed as

BiomarkersCell-to-cellImmune cellsImmunofluorescencePhenotype

Identifiers

PMID37191838
PMCPMC10409948
OpenAlexW4376641701

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.