Evidence map›Paper›PMID 37191774›Full record

ArticleFEBS letters2023

The exoribonuclease XRN2 mediates degradation of the long non-coding telomeric RNA TERRA.

Matthew Reiss, Joshua Keegan, Anne Aldrich, Shawn M Lyons, Rachel Litman Flynn

Open access · bronzeAbstract read
In one paragraph

Article in FEBS letters, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Matthew ReissDepartments of Pharmacology, Physiology & Biophysics and Medicine, Cancer Center, Boston University Chobanian & Avedisian School of Medicine, MA, Boston, USA.ORCID 0000-0001-5753-2540
Joshua KeeganDepartments of Pharmacology, Physiology & Biophysics and Medicine, Cancer Center, Boston University Chobanian & Avedisian School of Medicine, MA, Boston, USA.
Anne AldrichDepartments of Biochemistry and Cell Biology, Boston University Chobanian & Avedisian School of Medicine, MA, USA.
Shawn M LyonsDepartments of Biochemistry and Cell Biology, Boston University Chobanian & Avedisian School of Medicine, MA, USA.
Rachel Litman FlynnDepartments of Pharmacology, Physiology & Biophysics and Medicine, Cancer Center, Boston University Chobanian & Avedisian School of Medicine, MA, Boston, USA.ORCID 0000-0003-0562-1909
Boston University · US

Funding

Project-005UL1TR001430 · NCATS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI BAIR-MERRITT, MEGAN H, CENTER, DAVID M. · 2015 to 2024
$52.3M
Regulation of Ribosome BiogenesisR35GM146769 · NIGMS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI Shawn M Lyons · 2022 to 2026
$2.0M
Molecular Mechanisms Regulating the Alternative Lengthening of Telomeres PathwayR01CA201446 · NCI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI FLYNN, RACHEL L. · 2016 to 2022
$1.9M
Functional characterization of the telomere repeat containing RNA, TERRA, in telomere maintenanceR01CA214880 · NCI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI FLYNN, RACHEL L. · 2017 to 2022
$1.9M
NCATS NIH HHS UL1 TR001430NCI NIH HHS R01 CA201446NCI NIH HHS R01 CA214880NIGMS NIH HHS R35 GM146769
6 · The paper itself

Abstract

The telomeric repeat-containing RNA, TERRA, associates with both telomeric DNA and telomeric proteins, often forming RNA:DNA hybrids (R-loops). TERRA is most abundant in cancer cells utilizing the alternative lengthening of telomeres (ALT) pathway for telomere maintenance, suggesting that persistent TERRA R-loops may contribute to activation of the ALT mechanism. Therefore, we sought to identify the enzyme(s) that regulate TERRA metabolism in mammalian cells. Here, we identify that the 5'-3' exoribonuclease XRN2 regulates the stability of TERRA RNA. Moreover, while stabilization of TERRA alone was insufficient to drive ALT, depletion of XRN2 in ALT-positive cells led to a significant increase in TERRA R-loops and exacerbated ALT activity. Together, our findings highlight XRN2 as a key determinant of TERRA metabolism and telomere stability in cancer cells that rely on the ALT pathway.

Indexed as

RNA, Long NoncodingDNAExoribonucleasesRNATelomereTelomere HomeostasisDNAExoribonucleasesRNARNA, Long Noncodingalternative lengthening of telomeresauxin-inducible degronR-loopsTERRAXRN2

Identifiers

PMID37191774
PMCPMC10524182
OpenAlexW4376643214

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.