Evidence map›Paper›PMID 37191729›Full record

ArticleInternational journal of biometeorology2023

Using qPCR and microscopy to assess the impact of harvesting and weather conditions on the relationship between Alternaria alternata and Alternaria spp. spores in rural and urban atmospheres.

Godfrey Philliam Apangu, Carl Alexander Frisk, Beverley Adams-Groom, Geoffrey M Petch, Mary Hanson, Carsten Ambelas Skjøth

Open access · hybridAbstract read
In one paragraph

Article in International journal of biometeorology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
4.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 5 countries.

Godfrey Philliam ApanguSchool of Science and the Environment, University of Worcester, Henwick Grove, WR2 6AJ, Worcester, UK. godfrey.apangu@rothamsted.ac.uk.ORCID http://orcid.org/0000-0002-0707-8754
Carl Alexander FriskSchool of Science and the Environment, University of Worcester, Henwick Grove, WR2 6AJ, Worcester, UK.
Beverley Adams-GroomSchool of Science and the Environment, University of Worcester, Henwick Grove, WR2 6AJ, Worcester, UK.
Geoffrey M PetchSchool of Science and the Environment, University of Worcester, Henwick Grove, WR2 6AJ, Worcester, UK.
Mary HansonSchool of Science and the Environment, University of Worcester, Henwick Grove, WR2 6AJ, Worcester, UK.
Carsten Ambelas SkjøthSchool of Science and the Environment, University of Worcester, Henwick Grove, WR2 6AJ, Worcester, UK.
University of Worcester · GBAarhus University · DKEdith Cowan University · AUNorwegian Institute of Bioeconomy Research · NORothamsted Research · GB

Funding

H2020 Marie Skłodowska-Curie Actions project ID: CIG PCIG14-GA-2013-630745
6 · The paper itself

Abstract

Alternaria is a plant pathogen and human allergen. Alternaria alternata is one of the most abundant fungal spores in the air. The purpose of this study was to examine whether Alternaria spp. spore concentrations can be used to predict the abundance and spatio-temporal pattern of A. alternata spores in the air. This was investigated by testing the hypothesis that A. alternata dominates airborne Alternaria spp. spores and varies spatio-temporally. Secondarily, we aimed at investigating the relationship between airborne Alternaria spp. spores and the DNA profile of A. alternata spores between two proximate (~ 7 km apart) sites. These were examined by sampling Alternaria spp. spores using Burkard 7-day and cyclone samplers for the period 2016-2018 at Worcester and Lakeside campuses of the University of Worcester, UK. Daily Alternaria spp. spores from the Burkard traps were identified using optical microscopy whilst A. alternata from the cyclone samples was detected and quantified using quantitative polymerase chain reaction (qPCR). The results showed that either A. alternata or other Alternaria species spores dominate the airborne Alternaria spore concentrations, generally depending on weather conditions. Furthermore, although Alternaria spp. spore concentrations were similar for the two proximate sites, A. alternata spore concentrations significantly varied for those sites and it is highly likely that the airborne samples contained large amounts of small fragments of A. alternata. Overall, the study shows that there is a higher abundance of airborne Alternaria allergen than reported by aerobiological networks and the majority is likely to be from spore and hyphal fragments.

Indexed as

AlternariaMicroscopyAir MicrobiologyAllergensHumansSpores, FungalWeatherAllergensAllergensConcentrationeDNAFungiMicrobiology

Identifiers

PMID37191729
PMCPMC10267013
OpenAlexW4376642837

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.