Evidence map›Paper›PMID 37191291›Full record

ArticleeLife2023

Rapid and precise genome engineering in a naturally short-lived vertebrate.

Claire N Bedbrook, Ravi D Nath, Rahul Nagvekar, Karl Deisseroth, Anne Brunet

Open access · goldAbstract read
In one paragraph

Article in eLife, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Engulfment by brain macrophages in a short-lived vertebrate.bioRxiv : the preprint server for biology · 2026
    Article
  4. Article
  5. Molecular evolution of animal aging.The EMBO journal · 2026
    Review
  6. Article
  7. Article
  8. Article
  9. An RNA-binding regulatory cascade controls the switch from proliferation to differentiation in theProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  10. Review
  11. Review
  12. Article
  13. Review
  14. Fluorescent Tagging of Endogenous FOXO for Live Imaging and Pull-Down Assays.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. A new dawn for the study of cell type evolution.Development (Cambridge, England) · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Claire N Bedbrook *Department of Genetics, Stanford University, Stanford, United States.ORCID 0000-0003-3973-598X
Ravi D Nath *Department of Genetics, Stanford University, Stanford, United States.ORCID 0000-0003-0905-2707
Rahul NagvekarDepartment of Genetics, Stanford University, Stanford, United States.ORCID 0000-0001-8800-7503
Karl DeisserothDepartment of Bioengineering, Stanford University, Stanford, United States.
Anne BrunetDepartment of Genetics, Stanford University, Stanford, United States.ORCID 0000-0002-4608-6845
Stanford University · USBioengineering Center · RUHoward Hughes Medical Institute · USNeurosciences Institute · US

Funding

Training in Basic Research on Aging and Age-Related DiseaseT32AG000266 · NIA · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI Lisa M Ellerby · 1998 to 2026
$13.8M
Brain-wide screen for a neural pacemaker of agingR01AG063418 · NIA · STANFORD UNIVERSITY · PI BRUNET, ANNE, DEISSEROTH, KARL A. · 2018 to 2022
$13.5M
Stanford Training Program in Aging ResearchT32AG047126 · NIA · STANFORD UNIVERSITY · PI VYJEYANTHI S PERIYAKOIL, TONY WYSS-CORAY · 2014 to 2026
$4.3M
NIA NIH HHS R01 AG063418NIA NIH HHS T32 AG000266NIA NIH HHS T32 AG047126
6 · The paper itself

Abstract

The African turquoise killifish is a powerful vertebrate system to study complex phenotypes at scale, including aging and age-related disease. Here, we develop a rapid and precise CRISPR/Cas9-mediated knock-in approach in the killifish. We show its efficient application to precisely insert fluorescent reporters of different sizes at various genomic loci in order to drive cell-type- and tissue-specific expression. This knock-in method should allow the establishment of humanized disease models and the development of cell-type-specific molecular probes for studying complex vertebrate biology.

Indexed as

FundulidaeVertebratesAgingAnimalsGenomeModels, AnimalAfrican killifishagingCRISPR/Cas9-mediated knock-ingeneticsgenome engineeringgenomicsNothobranchius furzeri

Identifiers

PMID37191291
PMCPMC10188113
OpenAlexW4376641605

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.