Evidence map›Paper›PMID 37190808›Full record

ArticleCurrent computer-aided drug design2024

Exploring the Mechanisms of Self-made Kuiyu Pingchang Recipe for the Treatment of Ulcerative Colitis and Irritable Bowel Syndrome using a Network Pharmacology-based Approach and Molecular Docking.

Yong Wen, Xiaoxiang Wang, Ke Si, Ling Xu, Shuoyang Huang, Yu Zhan

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Article in Current computer-aided drug design, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yong WenDepartment of Traditional Chinese Medicine, The Affiliated Hospital of Southwest Medical University, Luzhou, 646000, China.ORCID 0000-0002-2538-0463
Xiaoxiang WangGastroenterology Department, Chengdu First People's Hospital, Chengdu, 610000, China.
Ke SiGastroenterology Department, Chengdu First People's Hospital, Chengdu, 610000, China.
Ling XuAnorectal Department, Luzhou Hospital of Traditional Chinese Medicine, Luzhou, 646000, China.
Shuoyang HuangGastrointestinal Surgery Department, Chengdu Second People's Hospital, Chengdu, 610017, China.
Yu ZhanGastroenterology Department, Chengdu First People's Hospital, Chengdu, 610000, China.ORCID 0000-0002-6197-8630

Funding

Chengdu Medical College Grant no. CYZYB20-20National Natural Science Foundation of China Grant no. 82004173
6 · The paper itself

Abstract

backgroundUlcerative colitis (UC) and irritable bowel syndrome (IBS) are common intestinal diseases. According to the clinical experience and curative effect, the authors formulated Kuiyu Pingchang Decoction (KYPCD) comprised of

objectiveThe aim of the present study was to explore the mechanisms of KYPCD in the treatment of UC and IBS following the Traditional Chinese Medicine (TCM) theory of "Treating different diseases with the same treatment".

methodsThe chemical ingredients and targets of KYPCD were obtained using the Traditional Chinese Medicine Systems Pharmacology database and analysis platform (TCMSP). The targets of UC and IBS were extracted using the DisGeNET, GeneCards, DrugBANK, OMIM and TTD databases. The "TCM-component-target" network and the "TCM-shared target-disease" network were imaged using Cytoscape software. The protein-protein interaction (PPI) network was built using the STRING database. The DAVID platform was used to analyze the Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways. Using Autodock Tools software, the main active components of KYPCD were molecularly docked with their targets and visualized using PyMOL.

resultsA total of 46 active ingredients of KYPCD corresponding to 243 potential targets, 1,565 targets of UC and 1,062 targets of IBS, and 70 targets among active ingredients and two diseases were screened. Core targets in the PPI network included IL6, TNF, AKT1, IL1B, TP53, EGFR and VEGFA. GO and KEGG enrichment analysis demonstrated 563 biological processes, 48 cellular components, 82 molecular functions and 144 signaling pathways. KEGG enrichment results revealed that the regulated pathways were mainly related to the PI3K-AKT, MAPK, HIF-1 and IL-17 pathways. The results of molecular docking analysis indicated that the core active ingredients of KYPCD had optimal binding activity to their corresponding targets.

conclusionKYPCD may use IL6, TNF, AKT1, IL1B, TP53, EGFR and VEGFA as the key targets to achieve the treatment of UC and IBS through the PI3K-AKT, MAPK, HIF-1 and IL-17 pathways.

Indexed as

Colitis, UlcerativeDrugs, Chinese HerbalIrritable Bowel SyndromeMedicine, Chinese TraditionalMolecular Docking SimulationNetwork PharmacologyHumansProtein Interaction MapsSignal TransductionDrugs, Chinese Herbalirritable bowel syndromeKuiyu pingchang decoctionmolecular dockingnetwork pharmacologytraditional chinese medicine.ulcerative colitis

Identifiers

PMID37190808

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.