Evidence map›Paper›PMID 37185503›Full record

ReviewBiosensors2023

Applications and Tuning Strategies for Transcription Factor-Based Metabolite Biosensors.

Gloria J Zhou, Fuzhong Zhang

Abstract readReview
In one paragraph

Review in Biosensors, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
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  17. Enhancing glucaric acid production fromApplied and environmental microbiology · 2024
    Article
  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Gloria J ZhouDepartment of Energy, Environmental and Chemical Engineering, Washington University in St. Louis, St. Louis, MO 63130, USA.ORCID 0000-0003-2082-2346
Fuzhong ZhangDepartment of Energy, Environmental and Chemical Engineering, Washington University in St. Louis, St. Louis, MO 63130, USA.ORCID 0000-0001-6979-7909

Funding

Supplement for Purchase of a Cell Sorter for R35GM133797R35GM133797 · NIGMS · WASHINGTON UNIVERSITY · PI ZHANG, FUZHONG · 2019 to 2023
$2.2M
NIGMS NIH HHS R35 GM133797NIGMS NIH HHS R35GM133797
6 · The paper itself

Abstract

Transcription factor (TF)-based biosensors are widely used for the detection of metabolites and the regulation of cellular pathways in response to metabolites. Several challenges hinder the direct application of TF-based sensors to new hosts or metabolic pathways, which often requires extensive tuning to achieve the optimal performance. These tuning strategies can involve transcriptional or translational control depending on the parameter of interest. In this review, we highlight recent strategies for engineering TF-based biosensors to obtain the desired performance and discuss additional design considerations that may influence a biosensor's performance. We also examine applications of these sensors and suggest important areas for further work to continue the advancement of small-molecule biosensors.

Indexed as

Biosensing TechniquesTranscription FactorsMetabolic EngineeringTranscription Factorsbiosensor applicationsbiosensor tuningdynamic regulationhigh-throughput screeningmetabolic heterogeneitytranscriptional controltranscription factortranslational control

Identifiers

PMID37185503
PMCPMC10136082

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.