Evidence map›Paper›PMID 37180391›Full record

ArticleFrontiers in plant science2023

Defining a diverse core collection of the Colombian Central Collection of potatoes: a tool to advance research and breeding.

Norma Constanza Manrique-Carpintero, Jhon A Berdugo-Cely, Ivania Cerón-Souza, Zahara Lasso-Paredes, Paula H Reyes-Herrera, Roxana Yockteng

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
5.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Norma Constanza Manrique-CarpinteroCorporación Colombiana de Investigación Agropecuaria-AGROSAVIA, Centro de Investigación Tibaitatá, Mosquera, Colombia.
Jhon A Berdugo-CelyCorporación Colombiana de Investigación Agropecuaria-AGROSAVIA, Centro de Investigación Tibaitatá, Mosquera, Colombia.
Ivania Cerón-SouzaCorporación Colombiana de Investigación Agropecuaria-AGROSAVIA, Centro de Investigación Tibaitatá, Mosquera, Colombia.
Zahara Lasso-ParedesCorporación Colombiana de Investigación Agropecuaria-AGROSAVIA, Centro de Investigación Tibaitatá, Mosquera, Colombia.
Paula H Reyes-HerreraCorporación Colombiana de Investigación Agropecuaria-AGROSAVIA, Centro de Investigación Tibaitatá, Mosquera, Colombia.
Roxana YocktengCorporación Colombiana de Investigación Agropecuaria-AGROSAVIA, Centro de Investigación Tibaitatá, Mosquera, Colombia.
Colombian Corporation for Agricultural Research - AGROSAVIA · COCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The highly diverse Colombian Central Collection (CCC) of cultivated potatoes is the most important source of genetic variation for breeding and the agricultural development of this staple crop in Colombia. Potato is the primary source of income for more than 100.000 farming families in Colombia. However, biotic and abiotic challenges limit crop production. Furthermore, climate change, food security, and malnutrition constraints call for adaptive crop development to be urgently addressed. The clonal CCC of potatoes contains 1,255 accessions - an extensive collection size that limits its optimal assessment and use. Our study evaluated different collection sizes from the whole clonal collection to define the best core collection that captures the total genetic diversity of this unique collection, to support a characterization more cost-effectively. Initially, we genotyped 1,141 accessions from the clonal collection and 20 breeding lines using 3,586 genome-wide polymorphic markers to study CCC's genetic diversity. The analysis of molecular variance confirmed the CCC's diversity with a significant population structure (Phi=0.359;

Indexed as

genetic diversitymini-core collectionmolecular markerspolyploidpopulation structure

Identifiers

PMID37180391
PMCPMC10173156
OpenAlexW4367293531

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.