Phylogenetic analyses of Candidatus Branchiomonas cysticola refine the taxonomic classification of Betaproteobacteria associated with epitheliocystis in fish.

Even Bysveen Mjølnerød, Erwan Lagadec, Are Nylund

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Article in Archives of microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it

0cells of the map it votes in

0citing papers in PubMed

0.2field-weighted citation impact, top 42% of its field

1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Even Bysveen MjølnerødFish Disease Research Group, Department of Biological Sciences, University of Bergen, PO Box 7803, 5020, Bergen, Norway. even.mjolnerod@uib.no.ORCID http://orcid.org/0000-0002-1649-6560

Erwan LagadecFish Disease Research Group, Department of Biological Sciences, University of Bergen, PO Box 7803, 5020, Bergen, Norway.ORCID http://orcid.org/0000-0001-5064-8145

Are NylundFish Disease Research Group, Department of Biological Sciences, University of Bergen, PO Box 7803, 5020, Bergen, Norway.ORCID http://orcid.org/0000-0002-1932-6604

University of Bergen · NO

Funding

Norwegian research council 237856/O30

6 · The paper itself

Abstract

Candidatus Branchiomonas cysticola is recognized as the most prevalent bacterial agent causing epitheliocystis in Atlantic salmon (Salmo salar). Based on its partial 16S rRNA sequence, the bacterium has previously been found to be a member of Burkholderiales in the class Betaproteobacteria. Multilocus Sequence Analysis (MLSA) of the bacterium and 60 type strains of Betaproteobacteria using newly identified housekeeping genes (dnaK, rpoC, and fusA) and ribosomal subunit sequences (16S and 23S), instead supported the bacterium's affiliation to Nitrosomodales. Taxonomic rank normalization by Relative Evolutionary Divergence (RED) showed the phylogenetic distinction between Cand. B. cysticola and its closest related type strain to be at the family level. A novel bacterial family named Branchiomonaceae has thus been proposed to include a monophyletic clade of Betaproteobacteria exclusively associated with epitheliocystis in fish.

Indexed as

Bacterial InfectionsBetaproteobacteriaBurkholderialesChlamydialesFish DiseasesSalmo salarAnimalsDNA, BacterialPhylogenyRNA, Ribosomal, 16SSequence Analysis, DNADNA, BacterialRNA, Ribosomal, 16S16S rRNACandidatus Branchiomonas cysticolaEpitheliocystisMLSAPhylogenyRelative evolutionary divergence

Identifiers

PMID37178378

DOI10.1007/s00203-023-03581-1

PMCPMC10182937

OpenAlexW4376612833

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.