Evidence map›Paper›PMID 37175801›Full record

ReviewInternational journal of molecular sciences2023

Phafins Are More Than Phosphoinositide-Binding Proteins.

Tuoxian Tang, Mahmudul Hasan, Daniel G S Capelluto

Open access · goldAbstract readReview
In one paragraph

Review in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Tuoxian TangDepartment of Biology, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0002-6747-461X
Mahmudul HasanProtein Signaling Domains Laboratory, Department of Biological Sciences, Fralin Life Sciences Institute and Center for Soft Matter and Biological Physics, Virginia Tech, Blacksburg, VA 24061, USA.ORCID 0000-0003-4761-2111
Daniel G S CapellutoProtein Signaling Domains Laboratory, Department of Biological Sciences, Fralin Life Sciences Institute and Center for Soft Matter and Biological Physics, Virginia Tech, Blacksburg, VA 24061, USA.ORCID 0000-0002-0412-4508
Virginia Tech · USUniversity of Pennsylvania · US

Funding

Deciphering the Molecular Assembly Mechanism of Giant DNA VirusesR01GM129525 · NIGMS · UNIVERSITY OF TEXAS EL PASO · PI XIAO, CHUAN · 2019 to 2023
$1.8M
NIGMS NIH HHS R01 GM129525NIH HHS R01 GM129525
6 · The paper itself

Abstract

Phafins are PH (Pleckstrin Homology) and FYVE (Fab1, YOTB, Vac1, and EEA1) domain-containing proteins. The Phafin protein family is classified into two groups based on their sequence homology and functional similarity: Phafin1 and Phafin2. This protein family is unique because both the PH and FYVE domains bind to phosphatidylinositol 3-phosphate [PtdIns(3)P], a phosphoinositide primarily found in endosomal and lysosomal membranes. Phafin proteins act as PtdIns(3)P effectors in apoptosis, endocytic cargo trafficking, and autophagy. Additionally, Phafin2 is recruited to macropinocytic compartments through coincidence detection of PtdIns(3)P and PtdIns(4)P. Membrane-associated Phafins serve as adaptor proteins that recruit other binding partners. In addition to the phosphoinositide-binding domains, Phafin proteins present a poly aspartic acid motif that regulates membrane binding specificity. In this review, we summarize the involvement of Phafins in several cellular pathways and their potential physiological functions while highlighting the similarities and differences between Phafin1 and Phafin2. Besides, we discuss research perspectives for Phafins.

Indexed as

Carrier ProteinsPhosphatidylinositolsApoptosisEndosomesIntracellular MembranesPhosphatidylinositol PhosphatesProtein BindingCarrier ProteinsPhosphatidylinositol PhosphatesPhosphatidylinositolsautoinhibitionFYVE domainmembrane remodelingPhafinPH domainPtdIns(3)PPtdIns(4)P

Identifiers

PMID37175801
PMCPMC10178739
OpenAlexW4367626309

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.