Evidence map›Paper›PMID 37175797›Full record

ArticleInternational journal of molecular sciences2023

Exploratory Transcriptomic Profiling Reveals the Role of Gut Microbiota in Vascular Dementia.

Navdeep Kaur, Geneva LaForce, Deepthi P Mallela, Prasenjit Prasad Saha, Jennifer Buffa, Xinmin S Li, Naseer Sangwan, Kasia Rothenberg, Weifei Zhu

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 17 citations in OpenAlex.

  1. Pooled it
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  4. Review
  5. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Navdeep KaurDepartment of Cardiovascular & Metabolic Sciences, Cleveland Clinic, Cleveland, OH 44195, USA.
Geneva LaForceDepartment of Cardiovascular & Metabolic Sciences, Cleveland Clinic, Cleveland, OH 44195, USA.ORCID 0000-0002-5046-5194
Deepthi P MallelaDepartment of Cardiovascular & Metabolic Sciences, Cleveland Clinic, Cleveland, OH 44195, USA.ORCID 0000-0002-2703-4353
Prasenjit Prasad SahaDepartment of Cardiovascular & Metabolic Sciences, Cleveland Clinic, Cleveland, OH 44195, USA.ORCID 0000-0003-4679-2368
Jennifer BuffaDepartment of Cardiovascular & Metabolic Sciences, Cleveland Clinic, Cleveland, OH 44195, USA.
Xinmin S LiDepartment of Cardiovascular & Metabolic Sciences, Cleveland Clinic, Cleveland, OH 44195, USA.
Naseer SangwanDepartment of Cardiovascular & Metabolic Sciences, Cleveland Clinic, Cleveland, OH 44195, USA.
Kasia RothenbergCleveland Clinic Lou Ruvo Center for Brain Health, Cleveland, OH 44195, USA.
Weifei ZhuDepartment of Cardiovascular & Metabolic Sciences, Cleveland Clinic, Cleveland, OH 44195, USA.ORCID 0000-0003-4355-134X
Cleveland Clinic · US

Funding

Gut Microbiota and Cerebral Vascular DiseaseR01HL150537 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI ZHU, WEIFEI · 2020 to 2023
$2.2M
NHLBI NIH HHS R01 HL150537
6 · The paper itself

Abstract

Stroke is the second most common cause of cognitive impairment and dementia. Vascular dementia (VaD), a cognitive impairment following a stroke, is common and significantly impacts the quality of life. We recently demonstrated via gut microbe transplant studies that the gut microbe-dependent trimethylamine-N-oxide (TMAO) pathway impacts stroke severity, both infarct size and long-term cognitive outcomes. However, the molecular mechanisms that underly the role of the microbiome in VaD have not been explored in depth. To address this issue, we performed a comprehensive RNA-sequencing analysis to identify differentially expressed (DE) genes in the ischemic cerebral cortex of mouse brains at pre-stroke and post-stroke day 1 and day 3. A total of 4016, 3752 and 7861 DE genes were identified at pre-stroke and post-stroke day 1 and day 3, respectively. The Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis indicated pathways of neurodegeneration in multiple diseases, chemokine signaling, calcium signaling, and IL-17 signaling as the key enriched pathways. Inflammatory response genes interleukin-1 beta (

Indexed as

Dementia, VascularGastrointestinal MicrobiomeStrokeAnimalsBasic Helix-Loop-Helix ProteinsLigandsMethylaminesMiceQuality of LifeTranscriptomeBasic Helix-Loop-Helix ProteinsLigandsMethylaminesNpas4 protein, mousetrimethyloxaminecholineneuroinflammationRNA-sequencingtrimethylamine-N-oxide (TMAO)vascular dementia (VaD)

Identifiers

PMID37175797
PMCPMC10178712
OpenAlexW4367624433

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.