Evidence map›Paper›PMID 37175610›Full record

ArticleInternational journal of molecular sciences2023

Combined Structural and Computational Study of the mRubyFT Fluorescent Timer Locked in Its Blue Form.

Konstantin M Boyko, Maria G Khrenova, Alena Y Nikolaeva, Pavel V Dorovatovskii, Anna V Vlaskina, Oksana M Subach, Vladimir O Popov, Fedor V Subach

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Konstantin M BoykoBach Institute of Biochemistry, Research Center of Biotechnology of the Russian Academy of Sciences, Leninsky Prospekt. 33, bld. 2, 119071 Moscow, Russia.ORCID 0000-0001-8229-189X
Maria G KhrenovaBach Institute of Biochemistry, Research Center of Biotechnology of the Russian Academy of Sciences, Leninsky Prospekt. 33, bld. 2, 119071 Moscow, Russia.ORCID 0000-0001-7117-3089
Alena Y NikolaevaNational Research Centre "Kurchatov Institute", Kurchatov Complex NBICS-Technologies, Akad. Kurchatova sqr., 1, 123182 Moscow, Russia.
Pavel V DorovatovskiiNational Research Centre "Kurchatov Institute", Kurchatov Complex NBICS-Technologies, Akad. Kurchatova sqr., 1, 123182 Moscow, Russia.
Anna V VlaskinaNational Research Centre "Kurchatov Institute", Kurchatov Complex NBICS-Technologies, Akad. Kurchatova sqr., 1, 123182 Moscow, Russia.
Oksana M SubachNational Research Centre "Kurchatov Institute", Kurchatov Complex NBICS-Technologies, Akad. Kurchatova sqr., 1, 123182 Moscow, Russia.ORCID 0000-0002-6197-0479
Vladimir O PopovBach Institute of Biochemistry, Research Center of Biotechnology of the Russian Academy of Sciences, Leninsky Prospekt. 33, bld. 2, 119071 Moscow, Russia.
Fedor V SubachNational Research Centre "Kurchatov Institute", Kurchatov Complex NBICS-Technologies, Akad. Kurchatova sqr., 1, 123182 Moscow, Russia.ORCID 0000-0003-2720-7821

Funding

Russian Science Foundation 21-74-20135Russian Science Foundation 22-13-00012
6 · The paper itself

Abstract

The mRubyFT is a monomeric genetically encoded fluorescent timer based on the mRuby2 fluorescent protein, which is characterized by the complete maturation of the blue form with the subsequent conversion to the red one. It has higher brightness in mammalian cells and higher photostability compared with other fluorescent timers. A high-resolution structure is a known characteristic of the mRubyFT with the red form chromophore, but structural details of its blue form remain obscure. In order to obtain insight into this, we obtained an S148I variant of the mRubyFT (mRubyFT

Indexed as

Coloring AgentsMolecular Dynamics SimulationGreen Fluorescent ProteinsLuminescent ProteinsColoring AgentsGreen Fluorescent ProteinsLuminescent Proteinsblue chromophorecell timercrystal structurefluorescent proteinfluorescent timermolecular modelingmRubymRubyFT

Identifiers

PMID37175610
PMCPMC10178504

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.