Evidence map›Paper›PMID 37175522›Full record

ArticleInternational journal of molecular sciences2023

Visual Detection of Stem-Loop Primer Amplification (SPA) Products without Denaturation Using Peroxidase-like DNA Machines (PxDM).

Yulia I Maltzeva, Daria A Gorbenko, Ekaterina V Nikitina, Maria S Rubel, Dmitry M Kolpashchikov

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Multicomponent DNA Nanomachines for Amplification-Free Viral RNA Detection.International journal of molecular sciences · 2025
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Yulia I MaltzevaLaboratory of Solution Chemistry of Advanced Materials and Technologies, ITMO University, 191002 St. Petersburg, Russia.ORCID 0009-0000-5531-2296
Daria A GorbenkoLaboratory of Solution Chemistry of Advanced Materials and Technologies, ITMO University, 191002 St. Petersburg, Russia.ORCID 0000-0002-7990-9094
Ekaterina V NikitinaPediatric Research and Clinical Center for Infectious Diseases, 197022 St. Petersburg, Russia.ORCID 0000-0002-9737-9496
Maria S RubelLaboratory of Solution Chemistry of Advanced Materials and Technologies, ITMO University, 191002 St. Petersburg, Russia.
Dmitry M KolpashchikovChemistry Department, University of Central Florida, 4000 Central Florida Boulevard, Orlando, FL 32816, USA.ORCID 0000-0002-8682-6553
ITMO University · RUUniversity of Central Florida · US

Funding

Russian Science Foundation 22-75-10073
6 · The paper itself

Abstract

Rapid, inexpensive, and accurate determination of nucleic acids is a decisive factor in evaluating population's health and monitoring treatment at point-of-care (POC) settings. Testing systems with visual outputs can provide instrument-free signal detection. Isothermal amplification technologies can substitute conventional polymerase chain reaction (PCR) testing due to compatibility with the POC diagnostic. Here, we have visually detected DNA fragments obtained by stem-loop-primer-assisted isothermal amplification (SPA), but not those obtained by PCR or LAMP amplification using DNA nanomachines with peroxidase-like activity (PxDM) with sensitivity to a single nucleotide substitution. Compared to the diagnostics with conventional loop-mediated isothermal amplification (LAMP), the PxDM method produces no false positive signals with the non-specific amplification products. The study suggests that PxDM, in conjunction with SPA isothermal amplification, can become a valid platform for POC testing systems.

Indexed as

Nucleic AcidsPeroxidaseDNANucleic Acid Amplification TechniquesPeroxidasesPolymerase Chain ReactionSensitivity and SpecificityDNANucleic AcidsPeroxidasePeroxidasesdetection of dsDNA ampliconsDNA-nanomachineG-quadruplexisothermal amplificationpoint-of-care diagnosticssingle nucleotide selectivity

Identifiers

PMID37175522
PMCPMC10177805
OpenAlexW4366988164

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.