Evidence map›Paper›PMID 37174071›Full record

ArticleCancers2023

Persistent Homology-Based Machine Learning Method for Filtering and Classifying Mammographic Microcalcification Images in Early Cancer Detection.

Aminah Abdul Malek, Mohd Almie Alias, Fatimah Abdul Razak, Mohd Salmi Md Noorani, Rozi Mahmud, Nur Fariha Syaqina Zulkepli

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 13 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Aminah Abdul MalekDepartment of Mathematical Sciences, Faculty of Science & Technology, Universiti Kebangsaan Malaysia (UKM), Bangi 43600, Selangor, Malaysia.ORCID 0000-0001-7566-8601
Mohd Almie AliasDepartment of Mathematical Sciences, Faculty of Science & Technology, Universiti Kebangsaan Malaysia (UKM), Bangi 43600, Selangor, Malaysia.ORCID 0000-0003-1358-4642
Fatimah Abdul RazakDepartment of Mathematical Sciences, Faculty of Science & Technology, Universiti Kebangsaan Malaysia (UKM), Bangi 43600, Selangor, Malaysia.ORCID 0000-0002-3045-7963
Mohd Salmi Md NooraniDepartment of Mathematical Sciences, Faculty of Science & Technology, Universiti Kebangsaan Malaysia (UKM), Bangi 43600, Selangor, Malaysia.
Rozi MahmudDepartment of Radiology and Imaging, Faculty of Medicine and Health Sciences, Universiti Putra Malaysia (UPM), Serdang 43400, Selangor, Malaysia.
Nur Fariha Syaqina ZulkepliSchool of Mathematical Sciences, Universiti Sains Malaysia (USM), Gelugor 11800, Penang, Malaysia.
National University of Malaysia · MYMalaysia Theological Seminary · MYUniversiti Putra Malaysia · MYUniversiti Sains Malaysia · MY

Funding

National University of Malaysia GUP-2021-046National University of Malaysia TAP-K020061
6 · The paper itself

Abstract

Microcalcifications in mammogram images are primary indicators for detecting the early stages of breast cancer. However, dense tissues and noise in the images make it challenging to classify the microcalcifications. Currently, preprocessing procedures such as noise removal techniques are applied directly on the images, which may produce a blurry effect and loss of image details. Further, most of the features used in classification models focus on local information of the images and are often burdened with details, resulting in data complexity. This research proposed a filtering and feature extraction technique using persistent homology (PH), a powerful mathematical tool used to study the structure of complex datasets and patterns. The filtering process is not performed directly on the image matrix but through the diagrams arising from PH. These diagrams will enable us to distinguish prominent characteristics of the image from noise. The filtered diagrams are then vectorised using PH features. Supervised machine learning models are trained on the MIAS and DDSM datasets to evaluate the extracted features' efficacy in discriminating between benign and malignant classes and to obtain the optimal filtering level. This study reveals that appropriate PH filtering levels and features can improve classification accuracy in early cancer detection.

Indexed as

filteringimage processingmicrocalcificationpersistent homologytopological data analysis

Identifiers

PMID37174071
PMCPMC10177619
OpenAlexW4376630880

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.