Evidence map›Paper›PMID 37173511›Full record

ArticleJournal of neuro-oncology2023

Histopathological auxiliary system for brain tumour (HAS-Bt) based on weakly supervised learning using a WHO CNS5-style pipeline.

Yixin Ma, Feng Shi, Tianyang Sun, Hong Chen, Haixia Cheng, Xiaojia Liu, Shuai Wu, Junfeng Lu, Yaping Zou, Jun Zhang and 3 more

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of neuro-oncology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Yixin Ma *Glioma Surgery Division, Neurologic Surgery Department, Huashan Hospital Fudan University, Shanghai, China.
Feng Shi *Department of Research and Development, Shanghai United Imaging Intelligence Co., Ltd., Shanghai, China.
Tianyang Sun *Department of Research and Development, Shanghai United Imaging Intelligence Co., Ltd., Shanghai, China.
Hong ChenNational Center for Neurological Disorders, Huashan Hospital Fudan University, Shanghai, China.
Haixia ChengNational Center for Neurological Disorders, Huashan Hospital Fudan University, Shanghai, China.
Xiaojia LiuNational Center for Neurological Disorders, Huashan Hospital Fudan University, Shanghai, China.
Shuai WuGlioma Surgery Division, Neurologic Surgery Department, Huashan Hospital Fudan University, Shanghai, China.
Junfeng LuGlioma Surgery Division, Neurologic Surgery Department, Huashan Hospital Fudan University, Shanghai, China.
Yaping ZouWuhan Zhongji Biotechnology Co., Ltd, Wuhan, China.
Jun ZhangWuhan Zhongji Biotechnology Co., Ltd, Wuhan, China.
Lei JinGlioma Surgery Division, Neurologic Surgery Department, Huashan Hospital Fudan University, Shanghai, China. ozlei91@126.com.
Dinggang ShenDepartment of Research and Development, Shanghai United Imaging Intelligence Co., Ltd., Shanghai, China. dinggang.Shen@gmail.com.
Jinsong WuGlioma Surgery Division, Neurologic Surgery Department, Huashan Hospital Fudan University, Shanghai, China. wujinsong@huashan.org.cn.

Funding

Shanghai Municipal Science and Technology Commision 22S31905400Shanghai Shenkang Hospital Development Center SHDC12018114
6 · The paper itself

Abstract

purposeClassification and grading of central nervous system (CNS) tumours play a critical role in the clinic. When WHO CNS5 simplifies the histopathology diagnosis and places greater emphasis on molecular pathology, artificial intelligence (AI) has been widely used to meet the increased need for an automatic histopathology scheme that could liberate pathologists from laborious work. This study was to explore the diagnosis scope and practicality of AI.

methodsA one-stop Histopathology Auxiliary System for Brain tumours (HAS-Bt) is introduced based on a pipeline-structured multiple instance learning (pMIL) framework developed with 1,385,163 patches from 1038 hematoxylin and eosin (H&E) slides. The system provides a streamlined service including slide scanning, whole-slide image (WSI) analysis and information management. A logical algorithm is used when molecular profiles are available.

resultsThe pMIL achieved an accuracy of 0.94 in a 9-type classification task on an independent dataset composed of 268 H&E slides. Three auxiliary functions are developed and a built-in decision tree with multiple molecular markers is used to automatically formed integrated diagnosis. The processing efficiency was 443.0 s per slide.

conclusionHAS-Bt shows outstanding performance and provides a novel aid for the integrated neuropathological diagnostic workflow of brain tumours using CNS 5 pipeline.

Indexed as

Artificial IntelligenceBrain NeoplasmsAlgorithmsHumansSupervised Machine LearningWorld Health OrganizationClinical practiceDeep learningHistologyMultiply instance learningNeuropathology

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.