Evidence map›Paper›PMID 37173411›Full record

ArticleEuropean journal of human genetics : EJHG2023

Identification and in vivo functional investigation of a HOMER2 nonstop variant causing hearing loss.

Christel Vaché, Nicolas Cubedo, Luke Mansard, Jérôme Sarniguet, David Baux, Valérie Faugère, Corinne Baudoin, Melody Moclyn, Renaud Touraine, Geneviève Lina-Granade and 5 more

Open access · greenAbstract readCase Reports
In one paragraph

Article in European journal of human genetics : EJHG, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Identification of a novel homozygousFrontiers in genetics · 2025
    Article
  4. Article
  5. 2023 in the European Journal of Human Genetics.European journal of human genetics : EJHG · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 1 country.

Christel VachéMolecular Genetics Laboratory, Univ Montpellier, CHU Montpellier, Montpellier, France. christel.vache@inserm.fr.ORCID 0000-0001-7076-9139
Nicolas CubedoMMDN, Univ Montpellier, EPHE, INSERM, Montpellier, France.
Luke MansardMolecular Genetics Laboratory, Univ Montpellier, CHU Montpellier, Montpellier, France.
Jérôme SarniguetMMDN, Univ Montpellier, EPHE, INSERM, Montpellier, France.
David BauxMolecular Genetics Laboratory, Univ Montpellier, CHU Montpellier, Montpellier, France.
Valérie FaugèreMolecular Genetics Laboratory, Univ Montpellier, CHU Montpellier, Montpellier, France.
Corinne BaudoinMolecular Genetics Laboratory, Univ Montpellier, CHU Montpellier, Montpellier, France.
Melody MoclynMolecular Genetics Laboratory, Univ Montpellier, CHU Montpellier, Montpellier, France.
Renaud TouraineDepartment of Genetics, CHU Hopital Nord, Saint-Etienne, France.
Geneviève Lina-GranadeDepartment of Oto-Rhino-Laryngology, Head and Neck Surgery, Edouard Herriot Hospital, Hospices Civils de Lyon, Lyon University Hospital, Lyon, France.
Mireille CosséeMolecular Genetics Laboratory, Univ Montpellier, CHU Montpellier, Montpellier, France.
Anne BergougnouxMolecular Genetics Laboratory, Univ Montpellier, CHU Montpellier, Montpellier, France.
Vasiliki KalatzisInstitute for Neurosciences of Montpellier (INM), Univ Montpellier, Inserm, Montpellier, France.ORCID 0000-0002-9626-8807
Mireille RosselMMDN, Univ Montpellier, EPHE, INSERM, Montpellier, France.ORCID 0000-0003-2275-0817
Anne-Françoise RouxMolecular Genetics Laboratory, Univ Montpellier, CHU Montpellier, Montpellier, France.
Inserm · FRUniversité de Montpellier · FRCentre National de la Recherche Scientifique · FRHôpital Nord · FRHospices Civils de Lyon · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DFNA68 is a rare subtype of autosomal dominant nonsyndromic hearing impairment caused by heterozygous alterations in the HOMER2 gene. To date, only 5 pathogenic or likely pathogenic coding variants, including two missense substitutions (c.188 C > T and c.587 G > C), a single base pair duplication (c.840dupC) and two short deletions (c.592_597delACCACA and c.832_836delCCTCA) have been described in 5 families. In this study, we report a novel HOMER2 variation, identified by massively parallel sequencing, in a Sicilian family suffering from progressive dominant hearing loss over 3 generations. This novel alteration is a nonstop substitution (c.1064 A > G) that converts the translational termination codon (TAG) of the gene into a tryptophan codon (TGG) and is predicted to extend the HOMER2 protein by 10 amino acids. RNA analyses from the proband suggested that HOMER2 transcripts carrying the nonstop variant escaped the non-stop decay pathway. Finally, in vivo studies using a zebrafish animal model and behavioral tests clearly established the deleterious impact of this novel HOMER2 alteration on hearing function. This study identifies the fourth causal variation responsible for DFNA68 and describes a simple in vivo approach to assess the pathogenicity of candidate HOMER2 variants.

Indexed as

DeafnessHearing LossHearing Loss, SensorineuralAnimalsCodon, TerminatorMutationPedigreeZebrafishCodon, Terminator

Identifiers

PMID37173411
PMCPMC10326047
OpenAlexW4376279121

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.