Evidence map›Paper›PMID 37170508›Full record

ArticleAnimal bioscience2023

Genome-wide single-nucleotide polymorphism data and mitochondrial hypervariable region 1 nucleotide sequence reveal the origin of the Akhal-Teke horse.

Zhoucairang Kang, Jinping Shi, Ting Liu, Yong Zhang, Quanwei Zhang, Zhe Liu, Jianfu Wang, Shuru Cheng

Abstract read
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Article in Animal bioscience, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

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4citing papers in PubMed
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4 citing papers in PubMed.

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5 · Who and what money

Authors and funding

8 authors.

Zhoucairang KangCollege of Animal Science and Technology, Gansu Agricultural University, Lanzhou, 730070, China.
Jinping ShiCollege of Animal Science and Technology, Gansu Agricultural University, Lanzhou, 730070, China.
Ting LiuCollege of Animal Science and Technology, Gansu Agricultural University, Lanzhou, 730070, China.
Yong ZhangCollege of Veterinary Medicine, Gansu Agricultural University, Lanzhou 730070, China.
Quanwei ZhangCollege of Life Science and Biotechnology, Gansu Agricultural University, Lanzhou 730070, China.
Zhe LiuCollege of Animal Science and Technology, Gansu Agricultural University, Lanzhou, 730070, China.
Jianfu WangCollege of Animal Science and Technology, Gansu Agricultural University, Lanzhou, 730070, China.
Shuru ChengCollege of Animal Science and Technology, Gansu Agricultural University, Lanzhou, 730070, China.

Funding

Agriculture and Pastoral Department of Gansu Province GARS-TSYZ-2-1Gansu Agricultural University GAU-XKTD-2022-22
6 · The paper itself

Abstract

objectiveThe study investigated the origin of the Akhal-Teke horse using genome-wide single-nucleotide polymorphism (SNP) data and mitochondrial hypervariable region 1 (HVR-1) nucleotide sequences.

methodsGenome-wide SNP data from 22 breeds (481 horses) and mitochondrial HVR-1 sequences from 24 breeds (544 sequences) worldwide to examine the origin of the Akhal- Teke horse. The data were analyzed using principal component analysis, linkage disequilibrium analysis, neighbor-joining dendrograms, and ancestry inference to determine the population relationships, ancestral source, genetic structure, and relationships with other varieties.

resultsA close genetic relationship between the Akhal-Teke horse and horses from the Middle East was found. Analysis of mitochondrial HVR-1 sequences showed that there were no shared haplotypes between the Akhal-Teke and Tarpan horses, and the mitochondrial data indicated that the Akhal-Teke horse has not historically expanded its group. Ancestral inference suggested that Arabian and Caspian horses were the likely ancestors of the Akhal- Teke horse.

conclusionThe Akhal-Teke horse originated in the Middle East.

Indexed as

Akhal-Teke HorseCentral AsiaMiddle EastMitochondrial HVR-1Single-nucleotide Polymorphism (SNP)

Identifiers

PMID37170508
PMCPMC10475378

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