Evidence map›Paper›PMID 37170250›Full record

ArticleBMC ophthalmology2023

A nonsense mutation in C8orf37 linked with retinitis pigmentosa, early macular degeneration, cataract, and myopia in an arRP family from North India.

Shiwali Goyal, Kabir Singh, Aashna Uppal, Vanita Vanita

Open access · goldAbstract readCase Reports
In one paragraph

Article in BMC ophthalmology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Shiwali GoyalDepartment of Human Genetics, Guru Nanak Dev University, Amritsar, Punjab, India.
Kabir SinghDr. Daljit Singh Eye Hospital, Amritsar, Punjab, India.
Aashna UppalDr. Daljit Singh Eye Hospital, Amritsar, Punjab, India.
Vanita VanitaDepartment of Human Genetics, Guru Nanak Dev University, Amritsar, Punjab, India. vanita.human@gndu.ac.in.
Guru Nanak Dev University · INSatguru Partap Singh Hospital · IN

Funding

Department of Biotechnology, Ministry of Science and Technology, India BT/IN/German/13/VK/2010 IND 10/036Indian Council of Medical Research No.3/1/2(4)/OPH/2016/NCD-II
6 · The paper itself

Abstract

objectiveThis study aimed at identifying the underlying genetic defect in a consanguineous autosomal recessive retinitis pigmentosa (arRP) (RP-1175) family having RP with early macular degeneration, cataract, and myopia.

methodsWhole-exome sequencing (WES) was performed on the DNA of the proband, and variants observed were validated in the rest of the affected and unaffected family members by Sanger sequencing. Different bioinformatics tools were applied to access the pathogenicity of the observed variant.

resultsA nonsense mutation i.e., c.555G > A (p.Trp185Ter) in C8orf37 in homozygous form, has been identified that segregated with the disease in the affected members. c.555G > A was absent in unaffected family members and in 107 ethnically matched controls, therefore ruling out its possibility of being a polymorphism.

conclusionsPresent study identifies a nonsense mutation (c.555G > A) at codon 185 in C8orf37 linked with arRP, early macular degeneration, posterior subcapsular cataract, and myopia. The identical mutation has previously been reported in a Pakistani family with isolated RP and in a Chinese family with RP and macular degeneration. This variable expressivity of the identified mutation c.555G > A in C8orf37 in the analyzed Indian family may be attributed to the presence of the modifier alleles. Also, Trp185 might be a mutation hotspot in Asian arRP patients and in the future, p.Trp185Ter in C8orf37 may be tested during initial screening in arRP cases especially belonging to a similar population.

Indexed as

CataractMacular DegenerationMyopiaRetinitis PigmentosaCodon, NonsenseDNA Mutational AnalysisEye ProteinsHumansMutationPedigreeProteinsCFAP418 protein, humanCodon, NonsenseEye ProteinsProteinsC8orf37Macular degenerationNonsense mutationRetinitis pigmentosaWhole-exome sequencing

Identifiers

PMID37170250
PMCPMC10173570
OpenAlexW4376137906

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.