Evidence map›Paper›PMID 37170023›Full record

ArticleArchives of virology2023

Genome characterization of a Turkish bovine rotavirus field isolate by shotgun metagenomics.

Emel Aksoy, Ahmet Kürşat Azkur

Abstract read
PubMed Publisher
In one paragraph

Article in Archives of virology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Emel AksoyDepartment of Virology, Faculty of Veterinary Medicine, Kirikkale University, Kirikkale, Türkiye.
Ahmet Kürşat AzkurDepartment of Virology, Faculty of Veterinary Medicine, Kirikkale University, Kirikkale, Türkiye. azkurkursat@hotmail.com.ORCID http://orcid.org/0000-0002-5597-8917
Kırıkkale University · TR

Funding

KIRIKKALE UNIVERSITY BAP 2021/111
6 · The paper itself

Abstract

A bovine rotavirus (BRV) isolate from Kirsehir was isolated from feces of a neonatal calf with diarrhea, identified, and sequenced by shotgun sequencing. Its genotype constellation is G10-P[5]-I2-R2-C2-M2-A3-N2-T6-E2-H3. The structural genes and the non-structural genes NSP1, NSP3, and NSP4 of the Kirsehir isolate were similar in sequence to those of BRVs identified in Turkey. However, VP2, NSP2, NSP4, and NSP5/6 showed similarity to those of rotaviruses from different animal hosts. These findings not only expand our current understanding of the diversity of rotaviruses but also contribute to our understanding of the evolution of rotaviruses at both the national and global levels and reinforce the significance of conducting further research on rotaviruses in Turkey.

Indexed as

RotavirusRotavirus InfectionsAnimalsCattleGenome, ViralGenotypePhylogenyReassortant VirusesTurkeyBovine rotavirusEvolutionNeonatal calf diarrheaShotgun sequencingVirus isolationWhole genome sequencing

Identifiers

PMID37170023
OpenAlexW4376226335

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.