Evidence map›Paper›PMID 37170002›Full record

ArticleVirus genes2023

Biological characteristics and genomic analysis of a novel Escherichia phage Kayfunavirus CY1.

Yajie Cao, Dongxin Ma, Yuqing Zhou, Leping Wang, Kaiou Han, Lei Li, Xinyu Mao, Ziyong Li, Yuxin Wu, Hui Liu and 2 more

Abstract read
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In one paragraph

Article in Virus genes, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Genome sequencing of3 Biotech · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Yajie CaoCollege of Animal Science and Technology, Guangxi University, 100 Daxue East Road, Nanning, 530004, People's Republic of China.
Dongxin MaCollege of Animal Science and Technology, Guangxi University, 100 Daxue East Road, Nanning, 530004, People's Republic of China.
Yuqing ZhouCollege of Animal Science and Technology, Guangxi University, 100 Daxue East Road, Nanning, 530004, People's Republic of China.
Leping WangCollege of Animal Science and Technology, Guangxi University, 100 Daxue East Road, Nanning, 530004, People's Republic of China.
Kaiou HanCollege of Animal Science and Technology, Guangxi University, 100 Daxue East Road, Nanning, 530004, People's Republic of China.
Lei LiCollege of Animal Science and Technology, Guangxi University, 100 Daxue East Road, Nanning, 530004, People's Republic of China.
Xinyu MaoCollege of Animal Science and Technology, Guangxi University, 100 Daxue East Road, Nanning, 530004, People's Republic of China.
Ziyong LiCollege of Animal Science and Technology, Guangxi University, 100 Daxue East Road, Nanning, 530004, People's Republic of China.
Yuxin WuCollege of Animal Science and Technology, Guangxi University, 100 Daxue East Road, Nanning, 530004, People's Republic of China.
Hui LiuCollege of Animal Science and Technology, Guangxi University, 100 Daxue East Road, Nanning, 530004, People's Republic of China.
Yizhou TanCollege of Animal Science and Technology, Guangxi University, 100 Daxue East Road, Nanning, 530004, People's Republic of China.
Xun LiCollege of Animal Science and Technology, Guangxi University, 100 Daxue East Road, Nanning, 530004, People's Republic of China. lixun198@163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

As the problem of bacterial resistance becomes serious day by day, bacteriophage as a potential antibiotic substitute attracts more and more researchers' interest. In this study, Escherichia phage Kayfunavirus CY1 was isolated from sewage samples of swine farms and identified by biological characteristics and genomic analysis. One-step growth curve showed that the latent period of phage CY1 was about 10 min, the outbreak period was about 40 min and the burst size was 35 PFU/cell. Analysis of the electron microscopy and whole-genome sequence showed that the phage should be classified as a member of the Autographiviridae family, Studiervirinae subfamily. Genomic analysis of phage CY1 (GenBank accession no. OM937123) revealed a genome size of 39,173 bp with an average GC content of 50.51% and 46 coding domain sequences (CDSs). Eight CDSs encoding proteins involved in the replication and regulation of phage DNA, 2 CDSs encoded lysis proteins, 14 CDSs encoded packing and morphogenesis proteins. Genomic and proteomic analysis identified no sequence that encoded for virulence factor, integration-related proteins or antibiotic resistance genes. In summary, morphological and genomics suggest that phage CY1 is more likely a novel Escherichia phage.

Indexed as

BacteriophagesCaudoviralesAnimalsEscherichiaGenome, ViralGenomicsProteomicsSwineBiological characteristicsEscherichia coliGenome analysisPhage

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.