Evidence map›Paper›PMID 37166614›Full record

ArticleIrish journal of medical science2023

Molecular and in silico analyses of SYN III gene variants in autism spectrum disorder.

Remzi Oguz Baris, Nilfer Sahin, Ayşegül Demirtas Bilgic, Cilem Ozdemir, Tuba Gokdogan Edgunlu

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Article in Irish journal of medical science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Remzi Oguz BarisFaculty of Medicine, Mugla Sitki Kocman University, Mugla, Turkey.
Nilfer SahinDepartment of Child and Adolescent Mental Health Diseases School of Medicine, Muğla Sıtkı Koçman University, Mugla, Turkey.
Ayşegül Demirtas BilgicDepartment of Medical Biology, Health Sciences Institution, Muğla Sıtkı Koçman University, Mugla, Turkey.
Cilem OzdemirDepartment of Medical Biology, Health Sciences Institution, Muğla Sıtkı Koçman University, Mugla, Turkey. cilemmozdemir@gmail.com.
Tuba Gokdogan EdgunluDepartment of Medical Biology, School of Medicine, Muğla Sıtkı Koçman University, Mugla, 48000, Turkey.
Muğla University · TR

Funding

Türkiye Bilimsel ve Teknolojik Araştırma Kurumu 1919B012003527
6 · The paper itself

Abstract

backgroundDefects in neurotransmission and synaptogenesis are noteworthy in the pathogenesis of ASD. Synapsin III (SYN III) is defined as a synaptic vesicle protein that plays an important role in synaptogenesis and regulation of neurotransmitter release and neurite outgrowth. Therefore, SYN III may associate with many neurodevelopmental diseases, including ASD.

aimThe aim of this study was to investigate whether the SYN III gene -631 C > G (rs133946) and -196 G > A (rs133945) polymorphisms are associated with susceptibility to ASD.

methodsSYN III variants and the risk of ASD were investigated in 26 healthy children and 24 ASD children. SYN III gene variants were genotyped by PCR-RFLP methods. The differences in genotype and allele frequencies between the ASD and control groups were calculated using the chi-square (χ2). We analysed the SYN III gene using web-based tools.

resultsOur results suggest that the presence of the AA genotype of the SYN III -196 G > A (rs133945) polymorphism affects the characteristics and development of ASD in children (p = 0.012). SYN III -631 C > G (rs133946) polymorphism was not associated with ASD (p = 0.524). We have shown the prediction of gene-gene interaction that SYN III is co-expressed with 17 genes, physical interaction with 3 genes, and co-localization with 12 genes. The importance of different genes (SYN I, II, III, GABRD, NOS1AP, GNAO1) for ASD pathogenesis was revealed by GO analysis.

conclusionConsidering the role of SYN III and related genes, especially in the synaptic vesicle pathway and neurotransmission, its effect on ASD can be further investigated.

Indexed as

Autism Spectrum DisorderAdaptor Proteins, Signal TransducingChildGenetic Predisposition to DiseaseGenotypeGTP-Binding Protein alpha Subunits, Gi-GoHumansPolymorphism, Single NucleotideSynapsinsAdaptor Proteins, Signal TransducingGNAO1 protein, humanGTP-Binding Protein alpha Subunits, Gi-GoNOS1AP protein, humanSynapsinsAutism spectrum disorderNeurodevelopmental disorderPolymorphismSynapsin III

Identifiers

PMID37166614
OpenAlexW4376132294

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.